Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18189 | 54790;54791;54792 | chr2:178604122;178604121;178604120 | chr2:179468849;179468848;179468847 |
N2AB | 16548 | 49867;49868;49869 | chr2:178604122;178604121;178604120 | chr2:179468849;179468848;179468847 |
N2A | 15621 | 47086;47087;47088 | chr2:178604122;178604121;178604120 | chr2:179468849;179468848;179468847 |
N2B | 9124 | 27595;27596;27597 | chr2:178604122;178604121;178604120 | chr2:179468849;179468848;179468847 |
Novex-1 | 9249 | 27970;27971;27972 | chr2:178604122;178604121;178604120 | chr2:179468849;179468848;179468847 |
Novex-2 | 9316 | 28171;28172;28173 | chr2:178604122;178604121;178604120 | chr2:179468849;179468848;179468847 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/T | rs2054184050 | None | 1.0 | N | 0.874 | 0.443 | 0.509168631294 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 6.55E-05 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
P/T | rs2054184050 | None | 1.0 | N | 0.874 | 0.443 | 0.509168631294 | gnomAD-4.0.0 | 2.03023E-06 | None | None | None | None | I | None | 0 | 6.15764E-05 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.40298E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0971 | likely_benign | 0.0857 | benign | -1.677 | Destabilizing | 1.0 | D | 0.816 | deleterious | N | 0.497493028 | None | None | I |
P/C | 0.7301 | likely_pathogenic | 0.6824 | pathogenic | -1.244 | Destabilizing | 1.0 | D | 0.855 | deleterious | None | None | None | None | I |
P/D | 0.7438 | likely_pathogenic | 0.7177 | pathogenic | -1.616 | Destabilizing | 1.0 | D | 0.878 | deleterious | None | None | None | None | I |
P/E | 0.4138 | ambiguous | 0.3695 | ambiguous | -1.502 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
P/F | 0.7232 | likely_pathogenic | 0.6363 | pathogenic | -1.09 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
P/G | 0.5014 | ambiguous | 0.4664 | ambiguous | -2.085 | Highly Destabilizing | 1.0 | D | 0.87 | deleterious | None | None | None | None | I |
P/H | 0.4069 | ambiguous | 0.3529 | ambiguous | -1.475 | Destabilizing | 1.0 | D | 0.861 | deleterious | N | 0.497090952 | None | None | I |
P/I | 0.4951 | ambiguous | 0.4309 | ambiguous | -0.603 | Destabilizing | 1.0 | D | 0.895 | deleterious | None | None | None | None | I |
P/K | 0.5317 | ambiguous | 0.479 | ambiguous | -1.408 | Destabilizing | 1.0 | D | 0.879 | deleterious | None | None | None | None | I |
P/L | 0.207 | likely_benign | 0.1528 | benign | -0.603 | Destabilizing | 1.0 | D | 0.885 | deleterious | N | 0.504319427 | None | None | I |
P/M | 0.4425 | ambiguous | 0.385 | ambiguous | -0.642 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
P/N | 0.5807 | likely_pathogenic | 0.5765 | pathogenic | -1.455 | Destabilizing | 1.0 | D | 0.89 | deleterious | None | None | None | None | I |
P/Q | 0.2538 | likely_benign | 0.2152 | benign | -1.451 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
P/R | 0.3814 | ambiguous | 0.3192 | benign | -1.054 | Destabilizing | 1.0 | D | 0.889 | deleterious | N | 0.502170916 | None | None | I |
P/S | 0.2168 | likely_benign | 0.1934 | benign | -2.035 | Highly Destabilizing | 1.0 | D | 0.873 | deleterious | N | 0.476162313 | None | None | I |
P/T | 0.2392 | likely_benign | 0.2047 | benign | -1.781 | Destabilizing | 1.0 | D | 0.874 | deleterious | N | 0.489747118 | None | None | I |
P/V | 0.3142 | likely_benign | 0.2706 | benign | -0.93 | Destabilizing | 1.0 | D | 0.881 | deleterious | None | None | None | None | I |
P/W | 0.8829 | likely_pathogenic | 0.8382 | pathogenic | -1.336 | Destabilizing | 1.0 | D | 0.833 | deleterious | None | None | None | None | I |
P/Y | 0.6723 | likely_pathogenic | 0.6071 | pathogenic | -1.008 | Destabilizing | 1.0 | D | 0.885 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.