Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18196 | 54811;54812;54813 | chr2:178604101;178604100;178604099 | chr2:179468828;179468827;179468826 |
N2AB | 16555 | 49888;49889;49890 | chr2:178604101;178604100;178604099 | chr2:179468828;179468827;179468826 |
N2A | 15628 | 47107;47108;47109 | chr2:178604101;178604100;178604099 | chr2:179468828;179468827;179468826 |
N2B | 9131 | 27616;27617;27618 | chr2:178604101;178604100;178604099 | chr2:179468828;179468827;179468826 |
Novex-1 | 9256 | 27991;27992;27993 | chr2:178604101;178604100;178604099 | chr2:179468828;179468827;179468826 |
Novex-2 | 9323 | 28192;28193;28194 | chr2:178604101;178604100;178604099 | chr2:179468828;179468827;179468826 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.983 | D | 0.661 | 0.458 | 0.319970858106 | gnomAD-4.0.0 | 1.59371E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43451E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.128 | likely_benign | 0.1041 | benign | -0.448 | Destabilizing | 0.025 | N | 0.422 | neutral | N | 0.506283083 | None | None | I |
S/C | 0.1262 | likely_benign | 0.1234 | benign | -0.223 | Destabilizing | 0.995 | D | 0.644 | neutral | N | 0.482248245 | None | None | I |
S/D | 0.9179 | likely_pathogenic | 0.9247 | pathogenic | -0.348 | Destabilizing | 0.957 | D | 0.701 | prob.neutral | None | None | None | None | I |
S/E | 0.9135 | likely_pathogenic | 0.9017 | pathogenic | -0.426 | Destabilizing | 0.916 | D | 0.683 | prob.neutral | None | None | None | None | I |
S/F | 0.5603 | ambiguous | 0.4553 | ambiguous | -0.965 | Destabilizing | 0.983 | D | 0.709 | prob.delet. | N | 0.507265034 | None | None | I |
S/G | 0.2965 | likely_benign | 0.2838 | benign | -0.598 | Destabilizing | 0.845 | D | 0.597 | neutral | None | None | None | None | I |
S/H | 0.6567 | likely_pathogenic | 0.6272 | pathogenic | -1.207 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
S/I | 0.6412 | likely_pathogenic | 0.5583 | ambiguous | -0.174 | Destabilizing | 0.975 | D | 0.72 | prob.delet. | None | None | None | None | I |
S/K | 0.9522 | likely_pathogenic | 0.9394 | pathogenic | -0.616 | Destabilizing | 0.916 | D | 0.691 | prob.neutral | None | None | None | None | I |
S/L | 0.248 | likely_benign | 0.2071 | benign | -0.174 | Destabilizing | 0.845 | D | 0.68 | prob.neutral | None | None | None | None | I |
S/M | 0.4242 | ambiguous | 0.3944 | ambiguous | 0.289 | Stabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
S/N | 0.4512 | ambiguous | 0.4295 | ambiguous | -0.381 | Destabilizing | 0.987 | D | 0.719 | prob.delet. | None | None | None | None | I |
S/P | 0.9857 | likely_pathogenic | 0.9739 | pathogenic | -0.235 | Destabilizing | 0.983 | D | 0.661 | neutral | D | 0.53350959 | None | None | I |
S/Q | 0.7767 | likely_pathogenic | 0.7499 | pathogenic | -0.69 | Destabilizing | 0.987 | D | 0.708 | prob.delet. | None | None | None | None | I |
S/R | 0.9277 | likely_pathogenic | 0.9002 | pathogenic | -0.373 | Destabilizing | 0.987 | D | 0.66 | neutral | None | None | None | None | I |
S/T | 0.3131 | likely_benign | 0.2873 | benign | -0.428 | Destabilizing | 0.892 | D | 0.619 | neutral | N | 0.474308527 | None | None | I |
S/V | 0.5155 | ambiguous | 0.4202 | ambiguous | -0.235 | Destabilizing | 0.95 | D | 0.693 | prob.neutral | None | None | None | None | I |
S/W | 0.7615 | likely_pathogenic | 0.7239 | pathogenic | -0.956 | Destabilizing | 0.999 | D | 0.771 | deleterious | None | None | None | None | I |
S/Y | 0.4785 | ambiguous | 0.4226 | ambiguous | -0.685 | Destabilizing | 0.994 | D | 0.709 | prob.delet. | N | 0.51556992 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.