Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18197 | 54814;54815;54816 | chr2:178604098;178604097;178604096 | chr2:179468825;179468824;179468823 |
N2AB | 16556 | 49891;49892;49893 | chr2:178604098;178604097;178604096 | chr2:179468825;179468824;179468823 |
N2A | 15629 | 47110;47111;47112 | chr2:178604098;178604097;178604096 | chr2:179468825;179468824;179468823 |
N2B | 9132 | 27619;27620;27621 | chr2:178604098;178604097;178604096 | chr2:179468825;179468824;179468823 |
Novex-1 | 9257 | 27994;27995;27996 | chr2:178604098;178604097;178604096 | chr2:179468825;179468824;179468823 |
Novex-2 | 9324 | 28195;28196;28197 | chr2:178604098;178604097;178604096 | chr2:179468825;179468824;179468823 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | rs1475050139 | None | 0.026 | N | 0.191 | 0.194 | 0.1749357433 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
P/A | rs1475050139 | None | 0.026 | N | 0.191 | 0.194 | 0.1749357433 | gnomAD-4.0.0 | 6.58189E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.47167E-05 | 0 | 0 |
P/S | rs1475050139 | None | 0.811 | N | 0.442 | 0.281 | 0.235664433957 | gnomAD-4.0.0 | 1.59361E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86331E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0921 | likely_benign | 0.078 | benign | -0.342 | Destabilizing | 0.026 | N | 0.191 | neutral | N | 0.491508418 | None | None | I |
P/C | 0.6935 | likely_pathogenic | 0.6134 | pathogenic | -0.51 | Destabilizing | 0.997 | D | 0.575 | neutral | None | None | None | None | I |
P/D | 0.5612 | ambiguous | 0.5177 | ambiguous | -0.191 | Destabilizing | 0.988 | D | 0.457 | neutral | None | None | None | None | I |
P/E | 0.36 | ambiguous | 0.3237 | benign | -0.323 | Destabilizing | 0.919 | D | 0.461 | neutral | None | None | None | None | I |
P/F | 0.6542 | likely_pathogenic | 0.5451 | ambiguous | -0.734 | Destabilizing | 0.976 | D | 0.591 | neutral | None | None | None | None | I |
P/G | 0.405 | ambiguous | 0.3319 | benign | -0.443 | Destabilizing | 0.851 | D | 0.484 | neutral | None | None | None | None | I |
P/H | 0.3238 | likely_benign | 0.2737 | benign | -0.105 | Destabilizing | 0.999 | D | 0.558 | neutral | None | None | None | None | I |
P/I | 0.3788 | ambiguous | 0.3151 | benign | -0.237 | Destabilizing | 0.851 | D | 0.513 | neutral | None | None | None | None | I |
P/K | 0.4337 | ambiguous | 0.3904 | ambiguous | -0.203 | Destabilizing | 0.919 | D | 0.455 | neutral | None | None | None | None | I |
P/L | 0.175 | likely_benign | 0.1323 | benign | -0.237 | Destabilizing | 0.64 | D | 0.497 | neutral | N | 0.486553886 | None | None | I |
P/M | 0.3365 | likely_benign | 0.2699 | benign | -0.188 | Destabilizing | 0.307 | N | 0.333 | neutral | None | None | None | None | I |
P/N | 0.3754 | ambiguous | 0.3299 | benign | 0.061 | Stabilizing | 0.988 | D | 0.573 | neutral | None | None | None | None | I |
P/Q | 0.1997 | likely_benign | 0.1689 | benign | -0.217 | Destabilizing | 0.984 | D | 0.512 | neutral | N | 0.470549545 | None | None | I |
P/R | 0.3228 | likely_benign | 0.2873 | benign | 0.293 | Stabilizing | 0.984 | D | 0.561 | neutral | N | 0.516348148 | None | None | I |
P/S | 0.1526 | likely_benign | 0.1247 | benign | -0.283 | Destabilizing | 0.811 | D | 0.442 | neutral | N | 0.511710332 | None | None | I |
P/T | 0.1166 | likely_benign | 0.0929 | benign | -0.317 | Destabilizing | 0.896 | D | 0.481 | neutral | N | 0.482254217 | None | None | I |
P/V | 0.2205 | likely_benign | 0.1872 | benign | -0.238 | Destabilizing | 0.851 | D | 0.469 | neutral | None | None | None | None | I |
P/W | 0.833 | likely_pathogenic | 0.7672 | pathogenic | -0.803 | Destabilizing | 0.999 | D | 0.665 | neutral | None | None | None | None | I |
P/Y | 0.6251 | likely_pathogenic | 0.5482 | ambiguous | -0.473 | Destabilizing | 0.996 | D | 0.59 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.