Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18201 | 54826;54827;54828 | chr2:178604086;178604085;178604084 | chr2:179468813;179468812;179468811 |
N2AB | 16560 | 49903;49904;49905 | chr2:178604086;178604085;178604084 | chr2:179468813;179468812;179468811 |
N2A | 15633 | 47122;47123;47124 | chr2:178604086;178604085;178604084 | chr2:179468813;179468812;179468811 |
N2B | 9136 | 27631;27632;27633 | chr2:178604086;178604085;178604084 | chr2:179468813;179468812;179468811 |
Novex-1 | 9261 | 28006;28007;28008 | chr2:178604086;178604085;178604084 | chr2:179468813;179468812;179468811 |
Novex-2 | 9328 | 28207;28208;28209 | chr2:178604086;178604085;178604084 | chr2:179468813;179468812;179468811 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/H | rs779191742 | -2.813 | 1.0 | D | 0.835 | 0.811 | 0.750328341064 | gnomAD-2.1.1 | 8.06E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 1.78E-05 | 0 |
Y/H | rs779191742 | -2.813 | 1.0 | D | 0.835 | 0.811 | 0.750328341064 | gnomAD-4.0.0 | 4.77992E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58821E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Y/A | 0.997 | likely_pathogenic | 0.9936 | pathogenic | -3.211 | Highly Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
Y/C | 0.9312 | likely_pathogenic | 0.8728 | pathogenic | -1.736 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.645851249 | None | None | N |
Y/D | 0.9971 | likely_pathogenic | 0.9958 | pathogenic | -3.821 | Highly Destabilizing | 1.0 | D | 0.86 | deleterious | D | 0.646053053 | None | None | N |
Y/E | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -3.605 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/F | 0.2965 | likely_benign | 0.2523 | benign | -1.324 | Destabilizing | 0.999 | D | 0.69 | prob.neutral | D | 0.551644197 | None | None | N |
Y/G | 0.9887 | likely_pathogenic | 0.983 | pathogenic | -3.61 | Highly Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | N |
Y/H | 0.9834 | likely_pathogenic | 0.9754 | pathogenic | -2.455 | Highly Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.64544764 | None | None | N |
Y/I | 0.9684 | likely_pathogenic | 0.9514 | pathogenic | -1.856 | Destabilizing | 1.0 | D | 0.821 | deleterious | None | None | None | None | N |
Y/K | 0.9989 | likely_pathogenic | 0.9986 | pathogenic | -2.465 | Highly Destabilizing | 1.0 | D | 0.848 | deleterious | None | None | None | None | N |
Y/L | 0.9455 | likely_pathogenic | 0.919 | pathogenic | -1.856 | Destabilizing | 0.999 | D | 0.708 | prob.neutral | None | None | None | None | N |
Y/M | 0.9857 | likely_pathogenic | 0.9767 | pathogenic | -1.551 | Destabilizing | 1.0 | D | 0.825 | deleterious | None | None | None | None | N |
Y/N | 0.9813 | likely_pathogenic | 0.9737 | pathogenic | -3.329 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | D | 0.645851249 | None | None | N |
Y/P | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -2.327 | Highly Destabilizing | 1.0 | D | 0.883 | deleterious | None | None | None | None | N |
Y/Q | 0.9984 | likely_pathogenic | 0.9974 | pathogenic | -3.036 | Highly Destabilizing | 1.0 | D | 0.818 | deleterious | None | None | None | None | N |
Y/R | 0.9957 | likely_pathogenic | 0.9942 | pathogenic | -2.339 | Highly Destabilizing | 1.0 | D | 0.845 | deleterious | None | None | None | None | N |
Y/S | 0.9873 | likely_pathogenic | 0.9798 | pathogenic | -3.564 | Highly Destabilizing | 1.0 | D | 0.849 | deleterious | D | 0.645851249 | None | None | N |
Y/T | 0.9955 | likely_pathogenic | 0.9924 | pathogenic | -3.228 | Highly Destabilizing | 1.0 | D | 0.85 | deleterious | None | None | None | None | N |
Y/V | 0.953 | likely_pathogenic | 0.9289 | pathogenic | -2.327 | Highly Destabilizing | 1.0 | D | 0.742 | deleterious | None | None | None | None | N |
Y/W | 0.8418 | likely_pathogenic | 0.8286 | pathogenic | -0.627 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.