Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18204 | 54835;54836;54837 | chr2:178604077;178604076;178604075 | chr2:179468804;179468803;179468802 |
N2AB | 16563 | 49912;49913;49914 | chr2:178604077;178604076;178604075 | chr2:179468804;179468803;179468802 |
N2A | 15636 | 47131;47132;47133 | chr2:178604077;178604076;178604075 | chr2:179468804;179468803;179468802 |
N2B | 9139 | 27640;27641;27642 | chr2:178604077;178604076;178604075 | chr2:179468804;179468803;179468802 |
Novex-1 | 9264 | 28015;28016;28017 | chr2:178604077;178604076;178604075 | chr2:179468804;179468803;179468802 |
Novex-2 | 9331 | 28216;28217;28218 | chr2:178604077;178604076;178604075 | chr2:179468804;179468803;179468802 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/G | rs778173480 | -1.901 | 0.946 | N | 0.761 | 0.415 | None | gnomAD-4.0.0 | 1.5949E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 1.14025E-04 | 0 | 5.7262E-06 | 0 | 6.06796E-05 |
E/Q | rs749849370 | -1.274 | 0.716 | N | 0.725 | 0.32 | 0.260249123532 | gnomAD-2.1.1 | 1.21E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 2.67E-05 | 0 |
E/Q | rs749849370 | -1.274 | 0.716 | N | 0.725 | 0.32 | 0.260249123532 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
E/Q | rs749849370 | -1.274 | 0.716 | N | 0.725 | 0.32 | 0.260249123532 | gnomAD-4.0.0 | 6.82064E-06 | None | None | None | None | N | None | 0 | 1.66817E-05 | None | 0 | 0 | None | 0 | 0 | 7.63237E-06 | 1.09888E-05 | 0 |
E/V | rs778173480 | None | 0.946 | N | 0.793 | 0.532 | 0.539970339866 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
E/V | rs778173480 | None | 0.946 | N | 0.793 | 0.532 | 0.539970339866 | gnomAD-4.0.0 | 1.59476E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86303E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.9518 | likely_pathogenic | 0.9363 | pathogenic | -1.283 | Destabilizing | 0.716 | D | 0.661 | neutral | D | 0.524164293 | None | None | N |
E/C | 0.9879 | likely_pathogenic | 0.9888 | pathogenic | -0.584 | Destabilizing | 0.998 | D | 0.802 | deleterious | None | None | None | None | N |
E/D | 0.8749 | likely_pathogenic | 0.8579 | pathogenic | -1.642 | Destabilizing | 0.834 | D | 0.634 | neutral | N | 0.473890453 | None | None | N |
E/F | 0.995 | likely_pathogenic | 0.995 | pathogenic | -0.878 | Destabilizing | 0.998 | D | 0.82 | deleterious | None | None | None | None | N |
E/G | 0.9509 | likely_pathogenic | 0.9398 | pathogenic | -1.696 | Destabilizing | 0.946 | D | 0.761 | deleterious | N | 0.519190771 | None | None | N |
E/H | 0.9845 | likely_pathogenic | 0.9837 | pathogenic | -0.856 | Destabilizing | 0.994 | D | 0.822 | deleterious | None | None | None | None | N |
E/I | 0.9858 | likely_pathogenic | 0.9829 | pathogenic | -0.099 | Destabilizing | 0.979 | D | 0.836 | deleterious | None | None | None | None | N |
E/K | 0.9722 | likely_pathogenic | 0.966 | pathogenic | -1.358 | Destabilizing | 0.016 | N | 0.463 | neutral | N | 0.516148896 | None | None | N |
E/L | 0.9766 | likely_pathogenic | 0.9748 | pathogenic | -0.099 | Destabilizing | 0.959 | D | 0.801 | deleterious | None | None | None | None | N |
E/M | 0.9793 | likely_pathogenic | 0.978 | pathogenic | 0.597 | Stabilizing | 0.998 | D | 0.814 | deleterious | None | None | None | None | N |
E/N | 0.9878 | likely_pathogenic | 0.9858 | pathogenic | -1.629 | Destabilizing | 0.959 | D | 0.8 | deleterious | None | None | None | None | N |
E/P | 0.9994 | likely_pathogenic | 0.9992 | pathogenic | -0.479 | Destabilizing | 0.979 | D | 0.815 | deleterious | None | None | None | None | N |
E/Q | 0.7583 | likely_pathogenic | 0.7385 | pathogenic | -1.302 | Destabilizing | 0.716 | D | 0.725 | prob.delet. | N | 0.51465185 | None | None | N |
E/R | 0.9688 | likely_pathogenic | 0.9652 | pathogenic | -1.234 | Destabilizing | 0.921 | D | 0.787 | deleterious | None | None | None | None | N |
E/S | 0.9601 | likely_pathogenic | 0.9521 | pathogenic | -2.262 | Highly Destabilizing | 0.769 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/T | 0.979 | likely_pathogenic | 0.9754 | pathogenic | -1.871 | Destabilizing | 0.959 | D | 0.772 | deleterious | None | None | None | None | N |
E/V | 0.96 | likely_pathogenic | 0.9548 | pathogenic | -0.479 | Destabilizing | 0.946 | D | 0.793 | deleterious | N | 0.513568457 | None | None | N |
E/W | 0.996 | likely_pathogenic | 0.9964 | pathogenic | -0.986 | Destabilizing | 0.998 | D | 0.81 | deleterious | None | None | None | None | N |
E/Y | 0.9911 | likely_pathogenic | 0.9916 | pathogenic | -0.699 | Destabilizing | 0.993 | D | 0.821 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.