Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18206 | 54841;54842;54843 | chr2:178604071;178604070;178604069 | chr2:179468798;179468797;179468796 |
N2AB | 16565 | 49918;49919;49920 | chr2:178604071;178604070;178604069 | chr2:179468798;179468797;179468796 |
N2A | 15638 | 47137;47138;47139 | chr2:178604071;178604070;178604069 | chr2:179468798;179468797;179468796 |
N2B | 9141 | 27646;27647;27648 | chr2:178604071;178604070;178604069 | chr2:179468798;179468797;179468796 |
Novex-1 | 9266 | 28021;28022;28023 | chr2:178604071;178604070;178604069 | chr2:179468798;179468797;179468796 |
Novex-2 | 9333 | 28222;28223;28224 | chr2:178604071;178604070;178604069 | chr2:179468798;179468797;179468796 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/T | None | None | 0.003 | N | 0.309 | 0.371 | 0.312001716656 | gnomAD-4.0.0 | 1.59315E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02792E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
R/A | 0.8397 | likely_pathogenic | 0.7385 | pathogenic | -2.045 | Highly Destabilizing | 0.218 | N | 0.551 | neutral | None | None | None | None | N |
R/C | 0.3508 | ambiguous | 0.3039 | benign | -1.941 | Destabilizing | 0.973 | D | 0.741 | deleterious | None | None | None | None | N |
R/D | 0.9797 | likely_pathogenic | 0.9737 | pathogenic | -1.086 | Destabilizing | 0.826 | D | 0.676 | prob.neutral | None | None | None | None | N |
R/E | 0.8086 | likely_pathogenic | 0.7604 | pathogenic | -0.87 | Destabilizing | 0.404 | N | 0.497 | neutral | None | None | None | None | N |
R/F | 0.8506 | likely_pathogenic | 0.7701 | pathogenic | -1.275 | Destabilizing | 0.906 | D | 0.746 | deleterious | None | None | None | None | N |
R/G | 0.7588 | likely_pathogenic | 0.6646 | pathogenic | -2.377 | Highly Destabilizing | 0.505 | D | 0.613 | neutral | N | 0.501237873 | None | None | N |
R/H | 0.3053 | likely_benign | 0.2753 | benign | -2.254 | Highly Destabilizing | 0.967 | D | 0.548 | neutral | None | None | None | None | N |
R/I | 0.7689 | likely_pathogenic | 0.6275 | pathogenic | -1.077 | Destabilizing | 0.642 | D | 0.748 | deleterious | N | 0.509378175 | None | None | N |
R/K | 0.1595 | likely_benign | 0.1067 | benign | -1.363 | Destabilizing | 0.001 | N | 0.149 | neutral | N | 0.488446683 | None | None | N |
R/L | 0.6017 | likely_pathogenic | 0.4199 | ambiguous | -1.077 | Destabilizing | 0.404 | N | 0.592 | neutral | None | None | None | None | N |
R/M | 0.5661 | likely_pathogenic | 0.4263 | ambiguous | -1.58 | Destabilizing | 0.973 | D | 0.646 | neutral | None | None | None | None | N |
R/N | 0.9374 | likely_pathogenic | 0.9136 | pathogenic | -1.378 | Destabilizing | 0.575 | D | 0.533 | neutral | None | None | None | None | N |
R/P | 0.9953 | likely_pathogenic | 0.9914 | pathogenic | -1.39 | Destabilizing | 0.906 | D | 0.726 | prob.delet. | None | None | None | None | N |
R/Q | 0.1895 | likely_benign | 0.1711 | benign | -1.22 | Destabilizing | 0.826 | D | 0.569 | neutral | None | None | None | None | N |
R/S | 0.9199 | likely_pathogenic | 0.8796 | pathogenic | -2.239 | Highly Destabilizing | 0.338 | N | 0.541 | neutral | N | 0.518692232 | None | None | N |
R/T | 0.8367 | likely_pathogenic | 0.71 | pathogenic | -1.815 | Destabilizing | 0.003 | N | 0.309 | neutral | N | 0.49776838 | None | None | N |
R/V | 0.7884 | likely_pathogenic | 0.6635 | pathogenic | -1.39 | Destabilizing | 0.704 | D | 0.677 | prob.neutral | None | None | None | None | N |
R/W | 0.527 | ambiguous | 0.4688 | ambiguous | -0.826 | Destabilizing | 0.991 | D | 0.744 | deleterious | None | None | None | None | N |
R/Y | 0.7101 | likely_pathogenic | 0.6667 | pathogenic | -0.684 | Destabilizing | 0.906 | D | 0.729 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.