Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18207 | 54844;54845;54846 | chr2:178604068;178604067;178604066 | chr2:179468795;179468794;179468793 |
N2AB | 16566 | 49921;49922;49923 | chr2:178604068;178604067;178604066 | chr2:179468795;179468794;179468793 |
N2A | 15639 | 47140;47141;47142 | chr2:178604068;178604067;178604066 | chr2:179468795;179468794;179468793 |
N2B | 9142 | 27649;27650;27651 | chr2:178604068;178604067;178604066 | chr2:179468795;179468794;179468793 |
Novex-1 | 9267 | 28024;28025;28026 | chr2:178604068;178604067;178604066 | chr2:179468795;179468794;179468793 |
Novex-2 | 9334 | 28225;28226;28227 | chr2:178604068;178604067;178604066 | chr2:179468795;179468794;179468793 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.016 | N | 0.237 | 0.26 | 0.31291088546 | gnomAD-4.0.0 | 1.59316E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02755E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.4595 | ambiguous | 0.3531 | ambiguous | -0.804 | Destabilizing | 0.716 | D | 0.529 | neutral | N | 0.484423838 | None | None | N |
E/C | 0.9584 | likely_pathogenic | 0.948 | pathogenic | -0.42 | Destabilizing | 0.998 | D | 0.7 | prob.neutral | None | None | None | None | N |
E/D | 0.4266 | ambiguous | 0.3614 | ambiguous | -1.014 | Destabilizing | 0.834 | D | 0.397 | neutral | N | 0.492700497 | None | None | N |
E/F | 0.9615 | likely_pathogenic | 0.936 | pathogenic | -0.132 | Destabilizing | 0.998 | D | 0.709 | prob.delet. | None | None | None | None | N |
E/G | 0.5252 | ambiguous | 0.4319 | ambiguous | -1.163 | Destabilizing | 0.946 | D | 0.565 | neutral | N | 0.479348183 | None | None | N |
E/H | 0.8958 | likely_pathogenic | 0.8445 | pathogenic | -0.26 | Destabilizing | 0.994 | D | 0.584 | neutral | None | None | None | None | N |
E/I | 0.7244 | likely_pathogenic | 0.6157 | pathogenic | 0.175 | Stabilizing | 0.979 | D | 0.74 | deleterious | None | None | None | None | N |
E/K | 0.5865 | likely_pathogenic | 0.4872 | ambiguous | -0.379 | Destabilizing | 0.016 | N | 0.237 | neutral | N | 0.50027983 | None | None | N |
E/L | 0.7375 | likely_pathogenic | 0.6207 | pathogenic | 0.175 | Stabilizing | 0.959 | D | 0.693 | prob.neutral | None | None | None | None | N |
E/M | 0.7674 | likely_pathogenic | 0.6803 | pathogenic | 0.532 | Stabilizing | 0.998 | D | 0.666 | neutral | None | None | None | None | N |
E/N | 0.7425 | likely_pathogenic | 0.6702 | pathogenic | -0.985 | Destabilizing | 0.959 | D | 0.589 | neutral | None | None | None | None | N |
E/P | 0.7425 | likely_pathogenic | 0.7104 | pathogenic | -0.13 | Destabilizing | 0.979 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Q | 0.3711 | ambiguous | 0.3098 | benign | -0.84 | Destabilizing | 0.716 | D | 0.537 | neutral | D | 0.522636615 | None | None | N |
E/R | 0.7094 | likely_pathogenic | 0.6171 | pathogenic | -0.043 | Destabilizing | 0.921 | D | 0.575 | neutral | None | None | None | None | N |
E/S | 0.6359 | likely_pathogenic | 0.5311 | ambiguous | -1.242 | Destabilizing | 0.769 | D | 0.512 | neutral | None | None | None | None | N |
E/T | 0.6347 | likely_pathogenic | 0.5292 | ambiguous | -0.934 | Destabilizing | 0.959 | D | 0.627 | neutral | None | None | None | None | N |
E/V | 0.5213 | ambiguous | 0.4111 | ambiguous | -0.13 | Destabilizing | 0.946 | D | 0.677 | prob.neutral | N | 0.480335688 | None | None | N |
E/W | 0.9846 | likely_pathogenic | 0.974 | pathogenic | 0.185 | Stabilizing | 0.998 | D | 0.701 | prob.neutral | None | None | None | None | N |
E/Y | 0.9423 | likely_pathogenic | 0.915 | pathogenic | 0.147 | Stabilizing | 0.993 | D | 0.695 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.