Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18228 | 54907;54908;54909 | chr2:178604005;178604004;178604003 | chr2:179468732;179468731;179468730 |
N2AB | 16587 | 49984;49985;49986 | chr2:178604005;178604004;178604003 | chr2:179468732;179468731;179468730 |
N2A | 15660 | 47203;47204;47205 | chr2:178604005;178604004;178604003 | chr2:179468732;179468731;179468730 |
N2B | 9163 | 27712;27713;27714 | chr2:178604005;178604004;178604003 | chr2:179468732;179468731;179468730 |
Novex-1 | 9288 | 28087;28088;28089 | chr2:178604005;178604004;178604003 | chr2:179468732;179468731;179468730 |
Novex-2 | 9355 | 28288;28289;28290 | chr2:178604005;178604004;178604003 | chr2:179468732;179468731;179468730 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/D | rs2154194670 | None | 0.946 | N | 0.754 | 0.369 | 0.270447802918 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
G/D | rs2154194670 | None | 0.946 | N | 0.754 | 0.369 | 0.270447802918 | gnomAD-4.0.0 | 6.57592E-06 | None | None | None | None | I | None | 2.40639E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.247 | likely_benign | 0.1538 | benign | -0.644 | Destabilizing | 0.035 | N | 0.302 | neutral | N | 0.453854107 | None | None | I |
G/C | 0.4776 | ambiguous | 0.3337 | benign | -0.934 | Destabilizing | 0.993 | D | 0.739 | prob.delet. | N | 0.517790942 | None | None | I |
G/D | 0.4319 | ambiguous | 0.2936 | benign | -0.976 | Destabilizing | 0.946 | D | 0.754 | deleterious | N | 0.45856928 | None | None | I |
G/E | 0.4697 | ambiguous | 0.2861 | benign | -1.061 | Destabilizing | 0.959 | D | 0.729 | prob.delet. | None | None | None | None | I |
G/F | 0.8391 | likely_pathogenic | 0.7003 | pathogenic | -1.033 | Destabilizing | 0.994 | D | 0.755 | deleterious | None | None | None | None | I |
G/H | 0.7483 | likely_pathogenic | 0.5698 | pathogenic | -1.194 | Destabilizing | 0.998 | D | 0.717 | prob.delet. | None | None | None | None | I |
G/I | 0.617 | likely_pathogenic | 0.4216 | ambiguous | -0.381 | Destabilizing | 0.959 | D | 0.759 | deleterious | None | None | None | None | I |
G/K | 0.8194 | likely_pathogenic | 0.6538 | pathogenic | -1.183 | Destabilizing | 0.959 | D | 0.733 | prob.delet. | None | None | None | None | I |
G/L | 0.7346 | likely_pathogenic | 0.553 | ambiguous | -0.381 | Destabilizing | 0.921 | D | 0.729 | prob.delet. | None | None | None | None | I |
G/M | 0.7239 | likely_pathogenic | 0.5336 | ambiguous | -0.369 | Destabilizing | 0.994 | D | 0.735 | prob.delet. | None | None | None | None | I |
G/N | 0.395 | ambiguous | 0.2803 | benign | -0.821 | Destabilizing | 0.959 | D | 0.735 | prob.delet. | None | None | None | None | I |
G/P | 0.9107 | likely_pathogenic | 0.8481 | pathogenic | -0.428 | Destabilizing | 0.979 | D | 0.741 | deleterious | None | None | None | None | I |
G/Q | 0.6588 | likely_pathogenic | 0.468 | ambiguous | -1.035 | Destabilizing | 0.979 | D | 0.753 | deleterious | None | None | None | None | I |
G/R | 0.7621 | likely_pathogenic | 0.5722 | pathogenic | -0.842 | Destabilizing | 0.946 | D | 0.751 | deleterious | N | 0.472669154 | None | None | I |
G/S | 0.2014 | likely_benign | 0.1318 | benign | -1.062 | Destabilizing | 0.716 | D | 0.57 | neutral | N | 0.454027465 | None | None | I |
G/T | 0.2839 | likely_benign | 0.1759 | benign | -1.07 | Destabilizing | 0.171 | N | 0.378 | neutral | None | None | None | None | I |
G/V | 0.4393 | ambiguous | 0.2694 | benign | -0.428 | Destabilizing | 0.898 | D | 0.732 | prob.delet. | N | 0.470575786 | None | None | I |
G/W | 0.7634 | likely_pathogenic | 0.5831 | pathogenic | -1.333 | Destabilizing | 0.998 | D | 0.723 | prob.delet. | None | None | None | None | I |
G/Y | 0.709 | likely_pathogenic | 0.5177 | ambiguous | -0.942 | Destabilizing | 0.998 | D | 0.751 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.