Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18231 | 54916;54917;54918 | chr2:178603996;178603995;178603994 | chr2:179468723;179468722;179468721 |
N2AB | 16590 | 49993;49994;49995 | chr2:178603996;178603995;178603994 | chr2:179468723;179468722;179468721 |
N2A | 15663 | 47212;47213;47214 | chr2:178603996;178603995;178603994 | chr2:179468723;179468722;179468721 |
N2B | 9166 | 27721;27722;27723 | chr2:178603996;178603995;178603994 | chr2:179468723;179468722;179468721 |
Novex-1 | 9291 | 28096;28097;28098 | chr2:178603996;178603995;178603994 | chr2:179468723;179468722;179468721 |
Novex-2 | 9358 | 28297;28298;28299 | chr2:178603996;178603995;178603994 | chr2:179468723;179468722;179468721 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/L | None | None | 0.201 | N | 0.664 | 0.216 | 0.119812018005 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9243 | likely_pathogenic | 0.882 | pathogenic | -2.281 | Highly Destabilizing | 0.617 | D | 0.727 | prob.delet. | None | None | None | None | N |
F/C | 0.651 | likely_pathogenic | 0.5457 | ambiguous | -1.66 | Destabilizing | 0.99 | D | 0.751 | deleterious | N | 0.464609818 | None | None | N |
F/D | 0.9799 | likely_pathogenic | 0.9677 | pathogenic | -2.502 | Highly Destabilizing | 0.85 | D | 0.789 | deleterious | None | None | None | None | N |
F/E | 0.9698 | likely_pathogenic | 0.9532 | pathogenic | -2.307 | Highly Destabilizing | 0.617 | D | 0.771 | deleterious | None | None | None | None | N |
F/G | 0.9591 | likely_pathogenic | 0.9331 | pathogenic | -2.693 | Highly Destabilizing | 0.617 | D | 0.757 | deleterious | None | None | None | None | N |
F/H | 0.7949 | likely_pathogenic | 0.7415 | pathogenic | -1.183 | Destabilizing | 0.005 | N | 0.608 | neutral | None | None | None | None | N |
F/I | 0.7364 | likely_pathogenic | 0.5633 | ambiguous | -0.965 | Destabilizing | 0.549 | D | 0.747 | deleterious | N | 0.476576251 | None | None | N |
F/K | 0.9702 | likely_pathogenic | 0.9619 | pathogenic | -2.096 | Highly Destabilizing | 0.85 | D | 0.784 | deleterious | None | None | None | None | N |
F/L | 0.9706 | likely_pathogenic | 0.951 | pathogenic | -0.965 | Destabilizing | 0.201 | N | 0.664 | neutral | N | 0.478152332 | None | None | N |
F/M | 0.7866 | likely_pathogenic | 0.7315 | pathogenic | -0.754 | Destabilizing | 0.972 | D | 0.745 | deleterious | None | None | None | None | N |
F/N | 0.9251 | likely_pathogenic | 0.8934 | pathogenic | -2.62 | Highly Destabilizing | 0.85 | D | 0.788 | deleterious | None | None | None | None | N |
F/P | 0.9995 | likely_pathogenic | 0.9993 | pathogenic | -1.41 | Destabilizing | 0.972 | D | 0.823 | deleterious | None | None | None | None | N |
F/Q | 0.937 | likely_pathogenic | 0.9136 | pathogenic | -2.502 | Highly Destabilizing | 0.85 | D | 0.811 | deleterious | None | None | None | None | N |
F/R | 0.9481 | likely_pathogenic | 0.931 | pathogenic | -1.698 | Destabilizing | 0.85 | D | 0.809 | deleterious | None | None | None | None | N |
F/S | 0.9165 | likely_pathogenic | 0.8635 | pathogenic | -3.228 | Highly Destabilizing | 0.549 | D | 0.74 | deleterious | D | 0.526004994 | None | None | N |
F/T | 0.9312 | likely_pathogenic | 0.893 | pathogenic | -2.919 | Highly Destabilizing | 0.92 | D | 0.748 | deleterious | None | None | None | None | N |
F/V | 0.7044 | likely_pathogenic | 0.5574 | ambiguous | -1.41 | Destabilizing | 0.549 | D | 0.774 | deleterious | N | 0.480573775 | None | None | N |
F/W | 0.6406 | likely_pathogenic | 0.5638 | ambiguous | -0.116 | Destabilizing | 0.92 | D | 0.728 | prob.delet. | None | None | None | None | N |
F/Y | 0.1785 | likely_benign | 0.1305 | benign | -0.451 | Destabilizing | 0.001 | N | 0.179 | neutral | N | 0.399478118 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.