Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18237 | 54934;54935;54936 | chr2:178603978;178603977;178603976 | chr2:179468705;179468704;179468703 |
N2AB | 16596 | 50011;50012;50013 | chr2:178603978;178603977;178603976 | chr2:179468705;179468704;179468703 |
N2A | 15669 | 47230;47231;47232 | chr2:178603978;178603977;178603976 | chr2:179468705;179468704;179468703 |
N2B | 9172 | 27739;27740;27741 | chr2:178603978;178603977;178603976 | chr2:179468705;179468704;179468703 |
Novex-1 | 9297 | 28114;28115;28116 | chr2:178603978;178603977;178603976 | chr2:179468705;179468704;179468703 |
Novex-2 | 9364 | 28315;28316;28317 | chr2:178603978;178603977;178603976 | chr2:179468705;179468704;179468703 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/P | rs201412693 | -0.639 | 0.013 | N | 0.341 | 0.09 | None | gnomAD-2.1.1 | 6.42972E-04 | None | None | None | None | N | None | 2.06937E-04 | 6.22242E-04 | None | 0 | 0 | None | 0 | None | 1.19942E-04 | 1.12554E-03 | 8.42933E-04 |
L/P | rs201412693 | -0.639 | 0.013 | N | 0.341 | 0.09 | None | gnomAD-3.1.2 | 6.12076E-04 | None | None | None | None | N | None | 2.41464E-04 | 4.59619E-04 | 0 | 0 | 0 | None | 9.42E-05 | 0 | 1.08926E-03 | 0 | 4.78469E-04 |
L/P | rs201412693 | -0.639 | 0.013 | N | 0.341 | 0.09 | None | 1000 genomes | 7.98722E-04 | None | None | None | None | N | None | 0 | 0 | None | None | 0 | 4E-03 | None | None | None | 0 | None |
L/P | rs201412693 | -0.639 | 0.013 | N | 0.341 | 0.09 | None | Rees (2021) | None | CNM | comp het with D32441Ffs*1, W35453* | None | None | N | Genetic analysis of TTN in 30 CM patients; comp het with truncating; Domain unfolded in vitro (Tm 17 degrees lower than WT) | None | None | None | None | None | None | None | None | None | None | None |
L/P | rs201412693 | -0.639 | 0.013 | N | 0.341 | 0.09 | None | gnomAD-4.0.0 | 9.12083E-04 | None | None | None | None | N | None | 1.73449E-04 | 4.83704E-04 | None | 0 | 0 | None | 1.09358E-04 | 1.65344E-04 | 1.1746E-03 | 1.09868E-05 | 5.60592E-04 |
L/R | rs201412693 | 0.001 | 0.007 | N | 0.32 | 0.129 | 0.554235320232 | gnomAD-2.1.1 | 4.02E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.89E-06 | 0 |
L/R | rs201412693 | 0.001 | 0.007 | N | 0.32 | 0.129 | 0.554235320232 | gnomAD-4.0.0 | 1.1638E-05 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.52988E-05 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
L/A | 0.1996 | likely_benign | 0.1805 | benign | -1.091 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | N |
L/C | 0.6005 | likely_pathogenic | 0.5753 | pathogenic | -0.936 | Destabilizing | 0.132 | N | 0.328 | neutral | None | None | None | None | N |
L/D | 0.7394 | likely_pathogenic | 0.6862 | pathogenic | -0.185 | Destabilizing | 0.004 | N | 0.379 | neutral | None | None | None | None | N |
L/E | 0.4178 | ambiguous | 0.3815 | ambiguous | -0.191 | Destabilizing | 0.004 | N | 0.389 | neutral | None | None | None | None | N |
L/F | 0.215 | likely_benign | 0.1711 | benign | -0.678 | Destabilizing | None | N | 0.143 | neutral | N | 0.446293416 | None | None | N |
L/G | 0.5103 | ambiguous | 0.4483 | ambiguous | -1.359 | Destabilizing | 0.001 | N | 0.316 | neutral | None | None | None | None | N |
L/H | 0.363 | ambiguous | 0.288 | benign | -0.362 | Destabilizing | 0.258 | N | 0.388 | neutral | N | 0.464532461 | None | None | N |
L/I | 0.0707 | likely_benign | 0.0677 | benign | -0.454 | Destabilizing | None | N | 0.106 | neutral | N | 0.361194662 | None | None | N |
L/K | 0.2911 | likely_benign | 0.2748 | benign | -0.627 | Destabilizing | 0.004 | N | 0.379 | neutral | None | None | None | None | N |
L/M | 0.1094 | likely_benign | 0.0996 | benign | -0.617 | Destabilizing | 0.021 | N | 0.288 | neutral | None | None | None | None | N |
L/N | 0.3244 | likely_benign | 0.2922 | benign | -0.566 | Destabilizing | 0.009 | N | 0.351 | neutral | None | None | None | None | N |
L/P | 0.4574 | ambiguous | 0.3974 | ambiguous | -0.634 | Destabilizing | 0.013 | N | 0.341 | neutral | N | 0.459145284 | None | None | N |
L/Q | 0.2081 | likely_benign | 0.1703 | benign | -0.676 | Destabilizing | 0.018 | N | 0.411 | neutral | None | None | None | None | N |
L/R | 0.276 | likely_benign | 0.2232 | benign | -0.108 | Destabilizing | 0.007 | N | 0.32 | neutral | N | 0.421797617 | None | None | N |
L/S | 0.2945 | likely_benign | 0.2515 | benign | -1.184 | Destabilizing | 0.001 | N | 0.24 | neutral | None | None | None | None | N |
L/T | 0.1489 | likely_benign | 0.1401 | benign | -1.06 | Destabilizing | None | N | 0.135 | neutral | None | None | None | None | N |
L/V | 0.0959 | likely_benign | 0.0892 | benign | -0.634 | Destabilizing | None | N | 0.173 | neutral | N | 0.420298894 | None | None | N |
L/W | 0.4604 | ambiguous | 0.3363 | benign | -0.685 | Destabilizing | 0.316 | N | 0.321 | neutral | None | None | None | None | N |
L/Y | 0.4854 | ambiguous | 0.3918 | ambiguous | -0.462 | Destabilizing | 0.004 | N | 0.321 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.