Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18253 | 54982;54983;54984 | chr2:178603930;178603929;178603928 | chr2:179468657;179468656;179468655 |
N2AB | 16612 | 50059;50060;50061 | chr2:178603930;178603929;178603928 | chr2:179468657;179468656;179468655 |
N2A | 15685 | 47278;47279;47280 | chr2:178603930;178603929;178603928 | chr2:179468657;179468656;179468655 |
N2B | 9188 | 27787;27788;27789 | chr2:178603930;178603929;178603928 | chr2:179468657;179468656;179468655 |
Novex-1 | 9313 | 28162;28163;28164 | chr2:178603930;178603929;178603928 | chr2:179468657;179468656;179468655 |
Novex-2 | 9380 | 28363;28364;28365 | chr2:178603930;178603929;178603928 | chr2:179468657;179468656;179468655 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | None | None | 0.984 | D | 0.683 | 0.646 | 0.513167974481 | gnomAD-4.0.0 | 1.59524E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86659E-06 | 0 | 0 |
G/R | None | None | 0.513 | D | 0.659 | 0.7 | 0.692283160571 | gnomAD-4.0.0 | 1.5949E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86587E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.923 | likely_pathogenic | 0.8762 | pathogenic | -0.545 | Destabilizing | 0.984 | D | 0.683 | prob.neutral | D | 0.559087762 | None | None | I |
G/C | 0.9762 | likely_pathogenic | 0.959 | pathogenic | -0.982 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
G/D | 0.975 | likely_pathogenic | 0.9601 | pathogenic | -0.765 | Destabilizing | 0.997 | D | 0.897 | deleterious | None | None | None | None | I |
G/E | 0.9881 | likely_pathogenic | 0.9797 | pathogenic | -0.899 | Destabilizing | 0.996 | D | 0.899 | deleterious | D | 0.559087762 | None | None | I |
G/F | 0.9976 | likely_pathogenic | 0.9952 | pathogenic | -1.065 | Destabilizing | 1.0 | D | 0.901 | deleterious | None | None | None | None | I |
G/H | 0.9935 | likely_pathogenic | 0.9888 | pathogenic | -0.818 | Destabilizing | 1.0 | D | 0.896 | deleterious | None | None | None | None | I |
G/I | 0.9972 | likely_pathogenic | 0.9943 | pathogenic | -0.519 | Destabilizing | 1.0 | D | 0.9 | deleterious | None | None | None | None | I |
G/K | 0.9901 | likely_pathogenic | 0.9854 | pathogenic | -1.134 | Destabilizing | 0.993 | D | 0.892 | deleterious | None | None | None | None | I |
G/L | 0.9949 | likely_pathogenic | 0.9909 | pathogenic | -0.519 | Destabilizing | 0.997 | D | 0.887 | deleterious | None | None | None | None | I |
G/M | 0.9966 | likely_pathogenic | 0.994 | pathogenic | -0.534 | Destabilizing | 1.0 | D | 0.873 | deleterious | None | None | None | None | I |
G/N | 0.9776 | likely_pathogenic | 0.9681 | pathogenic | -0.794 | Destabilizing | 0.997 | D | 0.855 | deleterious | None | None | None | None | I |
G/P | 0.9994 | likely_pathogenic | 0.9989 | pathogenic | -0.491 | Destabilizing | 0.999 | D | 0.905 | deleterious | None | None | None | None | I |
G/Q | 0.9855 | likely_pathogenic | 0.9769 | pathogenic | -1.058 | Destabilizing | 0.997 | D | 0.905 | deleterious | None | None | None | None | I |
G/R | 0.9778 | likely_pathogenic | 0.9631 | pathogenic | -0.66 | Destabilizing | 0.513 | D | 0.659 | neutral | D | 0.559341252 | None | None | I |
G/S | 0.8477 | likely_pathogenic | 0.7832 | pathogenic | -0.98 | Destabilizing | 0.997 | D | 0.86 | deleterious | None | None | None | None | I |
G/T | 0.9777 | likely_pathogenic | 0.9649 | pathogenic | -1.041 | Destabilizing | 0.997 | D | 0.899 | deleterious | None | None | None | None | I |
G/V | 0.9932 | likely_pathogenic | 0.9857 | pathogenic | -0.491 | Destabilizing | 0.998 | D | 0.877 | deleterious | D | 0.533096695 | None | None | I |
G/W | 0.9949 | likely_pathogenic | 0.9895 | pathogenic | -1.254 | Destabilizing | 1.0 | D | 0.854 | deleterious | None | None | None | None | I |
G/Y | 0.9949 | likely_pathogenic | 0.9904 | pathogenic | -0.912 | Destabilizing | 1.0 | D | 0.899 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.