Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18257 | 54994;54995;54996 | chr2:178603918;178603917;178603916 | chr2:179468645;179468644;179468643 |
N2AB | 16616 | 50071;50072;50073 | chr2:178603918;178603917;178603916 | chr2:179468645;179468644;179468643 |
N2A | 15689 | 47290;47291;47292 | chr2:178603918;178603917;178603916 | chr2:179468645;179468644;179468643 |
N2B | 9192 | 27799;27800;27801 | chr2:178603918;178603917;178603916 | chr2:179468645;179468644;179468643 |
Novex-1 | 9317 | 28174;28175;28176 | chr2:178603918;178603917;178603916 | chr2:179468645;179468644;179468643 |
Novex-2 | 9384 | 28375;28376;28377 | chr2:178603918;178603917;178603916 | chr2:179468645;179468644;179468643 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | rs1429008245 | None | 0.998 | N | 0.753 | 0.363 | 0.406806705197 | gnomAD-4.0.0 | 1.59652E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.03435E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.1004 | likely_benign | 0.0833 | benign | -1.403 | Destabilizing | 0.998 | D | 0.63 | neutral | N | 0.474265166 | None | None | I |
P/C | 0.6374 | likely_pathogenic | 0.6102 | pathogenic | -0.789 | Destabilizing | 1.0 | D | 0.863 | deleterious | None | None | None | None | I |
P/D | 0.9138 | likely_pathogenic | 0.906 | pathogenic | -1.419 | Destabilizing | 1.0 | D | 0.788 | deleterious | None | None | None | None | I |
P/E | 0.731 | likely_pathogenic | 0.7237 | pathogenic | -1.487 | Destabilizing | 1.0 | D | 0.78 | deleterious | None | None | None | None | I |
P/F | 0.6755 | likely_pathogenic | 0.5911 | pathogenic | -1.3 | Destabilizing | 0.844 | D | 0.659 | neutral | None | None | None | None | I |
P/G | 0.6879 | likely_pathogenic | 0.6223 | pathogenic | -1.641 | Destabilizing | 1.0 | D | 0.706 | prob.neutral | None | None | None | None | I |
P/H | 0.5632 | ambiguous | 0.5345 | ambiguous | -1.175 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.508880741 | None | None | I |
P/I | 0.5998 | likely_pathogenic | 0.4846 | ambiguous | -0.87 | Destabilizing | 0.999 | D | 0.827 | deleterious | None | None | None | None | I |
P/K | 0.8425 | likely_pathogenic | 0.8216 | pathogenic | -1.165 | Destabilizing | 1.0 | D | 0.781 | deleterious | None | None | None | None | I |
P/L | 0.3828 | ambiguous | 0.2638 | benign | -0.87 | Destabilizing | 0.998 | D | 0.753 | deleterious | N | 0.497129134 | None | None | I |
P/M | 0.604 | likely_pathogenic | 0.5223 | ambiguous | -0.544 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | I |
P/N | 0.8517 | likely_pathogenic | 0.8432 | pathogenic | -0.83 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
P/Q | 0.5464 | ambiguous | 0.5098 | ambiguous | -1.124 | Destabilizing | 1.0 | D | 0.82 | deleterious | None | None | None | None | I |
P/R | 0.7163 | likely_pathogenic | 0.6436 | pathogenic | -0.512 | Destabilizing | 1.0 | D | 0.841 | deleterious | N | 0.507866783 | None | None | I |
P/S | 0.3232 | likely_benign | 0.2887 | benign | -1.226 | Destabilizing | 1.0 | D | 0.737 | prob.delet. | N | 0.485634698 | None | None | I |
P/T | 0.3906 | ambiguous | 0.3157 | benign | -1.206 | Destabilizing | 1.0 | D | 0.774 | deleterious | N | 0.508120272 | None | None | I |
P/V | 0.3847 | ambiguous | 0.2985 | benign | -1.014 | Destabilizing | 0.999 | D | 0.754 | deleterious | None | None | None | None | I |
P/W | 0.8961 | likely_pathogenic | 0.8539 | pathogenic | -1.402 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | I |
P/Y | 0.7179 | likely_pathogenic | 0.6591 | pathogenic | -1.16 | Destabilizing | 0.998 | D | 0.835 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.