Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18259 | 55000;55001;55002 | chr2:178603912;178603911;178603910 | chr2:179468639;179468638;179468637 |
N2AB | 16618 | 50077;50078;50079 | chr2:178603912;178603911;178603910 | chr2:179468639;179468638;179468637 |
N2A | 15691 | 47296;47297;47298 | chr2:178603912;178603911;178603910 | chr2:179468639;179468638;179468637 |
N2B | 9194 | 27805;27806;27807 | chr2:178603912;178603911;178603910 | chr2:179468639;179468638;179468637 |
Novex-1 | 9319 | 28180;28181;28182 | chr2:178603912;178603911;178603910 | chr2:179468639;179468638;179468637 |
Novex-2 | 9386 | 28381;28382;28383 | chr2:178603912;178603911;178603910 | chr2:179468639;179468638;179468637 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | None | None | 0.919 | N | 0.561 | 0.198 | 0.278143212241 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1359 | likely_benign | 0.1231 | benign | -0.359 | Destabilizing | 0.132 | N | 0.403 | neutral | N | 0.494583222 | None | None | N |
E/C | 0.7759 | likely_pathogenic | 0.7924 | pathogenic | -0.223 | Destabilizing | 0.999 | D | 0.837 | deleterious | None | None | None | None | N |
E/D | 0.0978 | likely_benign | 0.0937 | benign | -0.4 | Destabilizing | 0.919 | D | 0.565 | neutral | N | 0.485558307 | None | None | N |
E/F | 0.6947 | likely_pathogenic | 0.6448 | pathogenic | -0.134 | Destabilizing | 0.997 | D | 0.822 | deleterious | None | None | None | None | N |
E/G | 0.1721 | likely_benign | 0.1556 | benign | -0.562 | Destabilizing | 0.851 | D | 0.543 | neutral | N | 0.478077054 | None | None | N |
E/H | 0.4721 | ambiguous | 0.4365 | ambiguous | 0.226 | Stabilizing | 0.999 | D | 0.593 | neutral | None | None | None | None | N |
E/I | 0.265 | likely_benign | 0.2412 | benign | 0.143 | Stabilizing | 0.991 | D | 0.799 | deleterious | None | None | None | None | N |
E/K | 0.1617 | likely_benign | 0.1426 | benign | 0.234 | Stabilizing | 0.919 | D | 0.561 | neutral | N | 0.500143757 | None | None | N |
E/L | 0.264 | likely_benign | 0.2234 | benign | 0.143 | Stabilizing | 0.981 | D | 0.571 | neutral | None | None | None | None | N |
E/M | 0.3703 | ambiguous | 0.3344 | benign | 0.115 | Stabilizing | 0.999 | D | 0.795 | deleterious | None | None | None | None | N |
E/N | 0.2553 | likely_benign | 0.2275 | benign | -0.169 | Destabilizing | 0.981 | D | 0.562 | neutral | None | None | None | None | N |
E/P | 0.2567 | likely_benign | 0.2477 | benign | -0.004 | Destabilizing | 0.991 | D | 0.641 | neutral | None | None | None | None | N |
E/Q | 0.1393 | likely_benign | 0.1293 | benign | -0.118 | Destabilizing | 0.988 | D | 0.622 | neutral | N | 0.521519107 | None | None | N |
E/R | 0.2899 | likely_benign | 0.2577 | benign | 0.538 | Stabilizing | 0.991 | D | 0.58 | neutral | None | None | None | None | N |
E/S | 0.1841 | likely_benign | 0.168 | benign | -0.322 | Destabilizing | 0.37 | N | 0.288 | neutral | None | None | None | None | N |
E/T | 0.2178 | likely_benign | 0.1953 | benign | -0.152 | Destabilizing | 0.883 | D | 0.619 | neutral | None | None | None | None | N |
E/V | 0.1669 | likely_benign | 0.1553 | benign | -0.004 | Destabilizing | 0.976 | D | 0.543 | neutral | N | 0.472191705 | None | None | N |
E/W | 0.8858 | likely_pathogenic | 0.8655 | pathogenic | 0.039 | Stabilizing | 0.999 | D | 0.831 | deleterious | None | None | None | None | N |
E/Y | 0.5367 | ambiguous | 0.5026 | ambiguous | 0.112 | Stabilizing | 0.997 | D | 0.814 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.