Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18261 | 55006;55007;55008 | chr2:178603906;178603905;178603904 | chr2:179468633;179468632;179468631 |
N2AB | 16620 | 50083;50084;50085 | chr2:178603906;178603905;178603904 | chr2:179468633;179468632;179468631 |
N2A | 15693 | 47302;47303;47304 | chr2:178603906;178603905;178603904 | chr2:179468633;179468632;179468631 |
N2B | 9196 | 27811;27812;27813 | chr2:178603906;178603905;178603904 | chr2:179468633;179468632;179468631 |
Novex-1 | 9321 | 28186;28187;28188 | chr2:178603906;178603905;178603904 | chr2:179468633;179468632;179468631 |
Novex-2 | 9388 | 28387;28388;28389 | chr2:178603906;178603905;178603904 | chr2:179468633;179468632;179468631 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/P | None | None | 0.999 | N | 0.764 | 0.295 | 0.395289904662 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.66327E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.446 | ambiguous | 0.3495 | ambiguous | -0.671 | Destabilizing | 0.944 | D | 0.553 | neutral | N | 0.503913083 | None | None | N |
S/C | 0.3783 | ambiguous | 0.373 | ambiguous | -0.541 | Destabilizing | 1.0 | D | 0.741 | deleterious | None | None | None | None | N |
S/D | 0.9753 | likely_pathogenic | 0.9712 | pathogenic | -1.177 | Destabilizing | 0.991 | D | 0.629 | neutral | None | None | None | None | N |
S/E | 0.9923 | likely_pathogenic | 0.9915 | pathogenic | -1.047 | Destabilizing | 0.991 | D | 0.651 | prob.neutral | None | None | None | None | N |
S/F | 0.9839 | likely_pathogenic | 0.973 | pathogenic | -0.406 | Destabilizing | 0.999 | D | 0.823 | deleterious | None | None | None | None | N |
S/G | 0.4108 | ambiguous | 0.3265 | benign | -1.036 | Destabilizing | 0.991 | D | 0.625 | neutral | None | None | None | None | N |
S/H | 0.9828 | likely_pathogenic | 0.9782 | pathogenic | -1.462 | Destabilizing | 1.0 | D | 0.729 | deleterious | None | None | None | None | N |
S/I | 0.9558 | likely_pathogenic | 0.9324 | pathogenic | 0.233 | Stabilizing | 0.995 | D | 0.822 | deleterious | None | None | None | None | N |
S/K | 0.9986 | likely_pathogenic | 0.9982 | pathogenic | -0.687 | Destabilizing | 0.991 | D | 0.629 | neutral | None | None | None | None | N |
S/L | 0.8143 | likely_pathogenic | 0.7382 | pathogenic | 0.233 | Stabilizing | 0.976 | D | 0.82 | deleterious | N | 0.50427825 | None | None | N |
S/M | 0.8727 | likely_pathogenic | 0.83 | pathogenic | 0.213 | Stabilizing | 1.0 | D | 0.729 | deleterious | None | None | None | None | N |
S/N | 0.9154 | likely_pathogenic | 0.9051 | pathogenic | -1.087 | Destabilizing | 0.991 | D | 0.647 | neutral | None | None | None | None | N |
S/P | 0.9918 | likely_pathogenic | 0.9877 | pathogenic | -0.032 | Destabilizing | 0.999 | D | 0.764 | deleterious | N | 0.521816755 | None | None | N |
S/Q | 0.9891 | likely_pathogenic | 0.9868 | pathogenic | -0.947 | Destabilizing | 0.999 | D | 0.708 | prob.delet. | None | None | None | None | N |
S/R | 0.9972 | likely_pathogenic | 0.996 | pathogenic | -0.89 | Destabilizing | 0.997 | D | 0.755 | deleterious | None | None | None | None | N |
S/T | 0.1789 | likely_benign | 0.1379 | benign | -0.822 | Destabilizing | 0.355 | N | 0.315 | neutral | N | 0.497274023 | None | None | N |
S/V | 0.8937 | likely_pathogenic | 0.8337 | pathogenic | -0.032 | Destabilizing | 0.995 | D | 0.803 | deleterious | None | None | None | None | N |
S/W | 0.9863 | likely_pathogenic | 0.9796 | pathogenic | -0.634 | Destabilizing | 1.0 | D | 0.76 | deleterious | None | None | None | None | N |
S/Y | 0.9818 | likely_pathogenic | 0.9746 | pathogenic | -0.253 | Destabilizing | 0.999 | D | 0.817 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.