Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18262 | 55009;55010;55011 | chr2:178603903;178603902;178603901 | chr2:179468630;179468629;179468628 |
N2AB | 16621 | 50086;50087;50088 | chr2:178603903;178603902;178603901 | chr2:179468630;179468629;179468628 |
N2A | 15694 | 47305;47306;47307 | chr2:178603903;178603902;178603901 | chr2:179468630;179468629;179468628 |
N2B | 9197 | 27814;27815;27816 | chr2:178603903;178603902;178603901 | chr2:179468630;179468629;179468628 |
Novex-1 | 9322 | 28189;28190;28191 | chr2:178603903;178603902;178603901 | chr2:179468630;179468629;179468628 |
Novex-2 | 9389 | 28390;28391;28392 | chr2:178603903;178603902;178603901 | chr2:179468630;179468629;179468628 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | None | None | 0.991 | N | 0.78 | 0.326 | 0.326881540566 | gnomAD-4.0.0 | 1.6019E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78676E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1617 | likely_benign | 0.1367 | benign | -0.209 | Destabilizing | 0.982 | D | 0.709 | prob.delet. | N | 0.461486582 | None | None | N |
D/C | 0.6111 | likely_pathogenic | 0.5391 | ambiguous | 0.048 | Stabilizing | 1.0 | D | 0.723 | deleterious | None | None | None | None | N |
D/E | 0.1318 | likely_benign | 0.1105 | benign | -0.283 | Destabilizing | 0.429 | N | 0.229 | neutral | N | 0.395242947 | None | None | N |
D/F | 0.5783 | likely_pathogenic | 0.4831 | ambiguous | -0.221 | Destabilizing | 1.0 | D | 0.701 | prob.delet. | None | None | None | None | N |
D/G | 0.2527 | likely_benign | 0.2031 | benign | -0.408 | Destabilizing | 0.991 | D | 0.78 | deleterious | N | 0.493060282 | None | None | N |
D/H | 0.3357 | likely_benign | 0.2506 | benign | -0.158 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.487517121 | None | None | N |
D/I | 0.2547 | likely_benign | 0.2124 | benign | 0.264 | Stabilizing | 0.999 | D | 0.721 | deleterious | None | None | None | None | N |
D/K | 0.31 | likely_benign | 0.2635 | benign | 0.191 | Stabilizing | 0.996 | D | 0.805 | deleterious | None | None | None | None | N |
D/L | 0.2721 | likely_benign | 0.2283 | benign | 0.264 | Stabilizing | 0.998 | D | 0.723 | deleterious | None | None | None | None | N |
D/M | 0.5123 | ambiguous | 0.4281 | ambiguous | 0.388 | Stabilizing | 1.0 | D | 0.73 | deleterious | None | None | None | None | N |
D/N | 0.1197 | likely_benign | 0.1042 | benign | 0.029 | Stabilizing | 0.998 | D | 0.761 | deleterious | N | 0.502141125 | None | None | N |
D/P | 0.441 | ambiguous | 0.3913 | ambiguous | 0.129 | Stabilizing | 0.999 | D | 0.812 | deleterious | None | None | None | None | N |
D/Q | 0.2949 | likely_benign | 0.2305 | benign | 0.054 | Stabilizing | 0.996 | D | 0.751 | deleterious | None | None | None | None | N |
D/R | 0.4206 | ambiguous | 0.3331 | benign | 0.332 | Stabilizing | 0.996 | D | 0.727 | deleterious | None | None | None | None | N |
D/S | 0.1359 | likely_benign | 0.1139 | benign | -0.113 | Destabilizing | 0.987 | D | 0.692 | prob.delet. | None | None | None | None | N |
D/T | 0.2353 | likely_benign | 0.187 | benign | 0.033 | Stabilizing | 0.998 | D | 0.801 | deleterious | None | None | None | None | N |
D/V | 0.1651 | likely_benign | 0.1389 | benign | 0.129 | Stabilizing | 0.998 | D | 0.721 | deleterious | N | 0.458991159 | None | None | N |
D/W | 0.8883 | likely_pathogenic | 0.831 | pathogenic | -0.137 | Destabilizing | 1.0 | D | 0.689 | prob.delet. | None | None | None | None | N |
D/Y | 0.2887 | likely_benign | 0.2303 | benign | -0.003 | Destabilizing | 1.0 | D | 0.703 | prob.delet. | N | 0.498112958 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.