Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18263 | 55012;55013;55014 | chr2:178603900;178603899;178603898 | chr2:179468627;179468626;179468625 |
N2AB | 16622 | 50089;50090;50091 | chr2:178603900;178603899;178603898 | chr2:179468627;179468626;179468625 |
N2A | 15695 | 47308;47309;47310 | chr2:178603900;178603899;178603898 | chr2:179468627;179468626;179468625 |
N2B | 9198 | 27817;27818;27819 | chr2:178603900;178603899;178603898 | chr2:179468627;179468626;179468625 |
Novex-1 | 9323 | 28192;28193;28194 | chr2:178603900;178603899;178603898 | chr2:179468627;179468626;179468625 |
Novex-2 | 9390 | 28393;28394;28395 | chr2:178603900;178603899;178603898 | chr2:179468627;179468626;179468625 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | None | None | 0.104 | N | 0.393 | 0.256 | 0.203808441222 | gnomAD-4.0.0 | 1.60278E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.88509E-06 | 0 | 0 |
P/L | None | None | 0.002 | N | 0.471 | 0.142 | 0.358134431457 | gnomAD-4.0.0 | 6.86437E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.0221E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.0705 | likely_benign | 0.0605 | benign | -0.924 | Destabilizing | 0.104 | N | 0.393 | neutral | N | 0.519590736 | None | None | N |
P/C | 0.3727 | ambiguous | 0.315 | benign | -0.63 | Destabilizing | 0.005 | N | 0.479 | neutral | None | None | None | None | N |
P/D | 0.5224 | ambiguous | 0.4207 | ambiguous | -0.943 | Destabilizing | 0.428 | N | 0.464 | neutral | None | None | None | None | N |
P/E | 0.3388 | likely_benign | 0.2463 | benign | -1.051 | Destabilizing | 0.428 | N | 0.45 | neutral | None | None | None | None | N |
P/F | 0.4226 | ambiguous | 0.2806 | benign | -1.029 | Destabilizing | 0.568 | D | 0.582 | neutral | None | None | None | None | N |
P/G | 0.2942 | likely_benign | 0.2188 | benign | -1.101 | Destabilizing | 0.428 | N | 0.504 | neutral | None | None | None | None | N |
P/H | 0.2922 | likely_benign | 0.2114 | benign | -0.62 | Destabilizing | 0.984 | D | 0.552 | neutral | None | None | None | None | N |
P/I | 0.243 | likely_benign | 0.1716 | benign | -0.586 | Destabilizing | 0.272 | N | 0.577 | neutral | None | None | None | None | N |
P/K | 0.4198 | ambiguous | 0.2952 | benign | -0.809 | Destabilizing | 0.428 | N | 0.47 | neutral | None | None | None | None | N |
P/L | 0.1218 | likely_benign | 0.0831 | benign | -0.586 | Destabilizing | 0.002 | N | 0.471 | neutral | N | 0.460143248 | None | None | N |
P/M | 0.2404 | likely_benign | 0.1782 | benign | -0.39 | Destabilizing | 0.724 | D | 0.555 | neutral | None | None | None | None | N |
P/N | 0.4181 | ambiguous | 0.3236 | benign | -0.47 | Destabilizing | 0.724 | D | 0.555 | neutral | None | None | None | None | N |
P/Q | 0.2725 | likely_benign | 0.1928 | benign | -0.787 | Destabilizing | 0.8 | D | 0.516 | neutral | N | 0.499633895 | None | None | N |
P/R | 0.3095 | likely_benign | 0.199 | benign | -0.149 | Destabilizing | 0.8 | D | 0.558 | neutral | N | 0.495025539 | None | None | N |
P/S | 0.1303 | likely_benign | 0.1077 | benign | -0.818 | Destabilizing | 0.009 | N | 0.267 | neutral | N | 0.50760566 | None | None | N |
P/T | 0.0975 | likely_benign | 0.087 | benign | -0.836 | Destabilizing | 0.22 | N | 0.521 | neutral | N | 0.480933756 | None | None | N |
P/V | 0.1566 | likely_benign | 0.1208 | benign | -0.664 | Destabilizing | 0.272 | N | 0.503 | neutral | None | None | None | None | N |
P/W | 0.6216 | likely_pathogenic | 0.4372 | ambiguous | -1.094 | Destabilizing | 0.984 | D | 0.639 | neutral | None | None | None | None | N |
P/Y | 0.4514 | ambiguous | 0.3172 | benign | -0.83 | Destabilizing | 0.842 | D | 0.595 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.