Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18267 | 55024;55025;55026 | chr2:178603888;178603887;178603886 | chr2:179468615;179468614;179468613 |
N2AB | 16626 | 50101;50102;50103 | chr2:178603888;178603887;178603886 | chr2:179468615;179468614;179468613 |
N2A | 15699 | 47320;47321;47322 | chr2:178603888;178603887;178603886 | chr2:179468615;179468614;179468613 |
N2B | 9202 | 27829;27830;27831 | chr2:178603888;178603887;178603886 | chr2:179468615;179468614;179468613 |
Novex-1 | 9327 | 28204;28205;28206 | chr2:178603888;178603887;178603886 | chr2:179468615;179468614;179468613 |
Novex-2 | 9394 | 28405;28406;28407 | chr2:178603888;178603887;178603886 | chr2:179468615;179468614;179468613 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/E | rs878876923 | None | 0.013 | N | 0.541 | 0.166 | 0.275641507738 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 1.47E-05 | 0 | 0 |
G/E | rs878876923 | None | 0.013 | N | 0.541 | 0.166 | 0.275641507738 | gnomAD-4.0.0 | 2.61866E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 4.92858E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.0733 | likely_benign | 0.0565 | benign | -0.825 | Destabilizing | None | N | 0.091 | neutral | N | 0.458134924 | None | None | N |
G/C | 0.1151 | likely_benign | 0.0999 | benign | -1.091 | Destabilizing | 0.492 | N | 0.667 | prob.neutral | None | None | None | None | N |
G/D | 0.2386 | likely_benign | 0.1589 | benign | -1.903 | Destabilizing | None | N | 0.313 | neutral | None | None | None | None | N |
G/E | 0.1467 | likely_benign | 0.0979 | benign | -2.013 | Highly Destabilizing | 0.013 | N | 0.541 | neutral | N | 0.425675789 | None | None | N |
G/F | 0.4512 | ambiguous | 0.2986 | benign | -1.42 | Destabilizing | 0.204 | N | 0.733 | deleterious | None | None | None | None | N |
G/H | 0.3064 | likely_benign | 0.2011 | benign | -1.202 | Destabilizing | 0.492 | N | 0.61 | neutral | None | None | None | None | N |
G/I | 0.1476 | likely_benign | 0.1007 | benign | -0.687 | Destabilizing | 0.018 | N | 0.658 | prob.neutral | None | None | None | None | N |
G/K | 0.2 | likely_benign | 0.1369 | benign | -1.303 | Destabilizing | 0.018 | N | 0.596 | neutral | None | None | None | None | N |
G/L | 0.2253 | likely_benign | 0.1426 | benign | -0.687 | Destabilizing | 0.007 | N | 0.534 | neutral | None | None | None | None | N |
G/M | 0.2597 | likely_benign | 0.1816 | benign | -0.46 | Destabilizing | 0.204 | N | 0.677 | prob.neutral | None | None | None | None | N |
G/N | 0.2768 | likely_benign | 0.1961 | benign | -1.038 | Destabilizing | 0.018 | N | 0.567 | neutral | None | None | None | None | N |
G/P | 0.9385 | likely_pathogenic | 0.8711 | pathogenic | -0.698 | Destabilizing | 0.112 | N | 0.703 | prob.delet. | None | None | None | None | N |
G/Q | 0.194 | likely_benign | 0.1304 | benign | -1.38 | Destabilizing | 0.112 | N | 0.675 | prob.neutral | None | None | None | None | N |
G/R | 0.1583 | likely_benign | 0.1061 | benign | -0.814 | Destabilizing | 0.087 | N | 0.687 | prob.delet. | N | 0.402281641 | None | None | N |
G/S | 0.0837 | likely_benign | 0.0694 | benign | -1.141 | Destabilizing | None | N | 0.151 | neutral | None | None | None | None | N |
G/T | 0.0832 | likely_benign | 0.0683 | benign | -1.203 | Destabilizing | 0.007 | N | 0.537 | neutral | None | None | None | None | N |
G/V | 0.0987 | likely_benign | 0.0729 | benign | -0.698 | Destabilizing | None | N | 0.281 | neutral | N | 0.480915783 | None | None | N |
G/W | 0.3792 | ambiguous | 0.2506 | benign | -1.645 | Destabilizing | 0.747 | D | 0.647 | neutral | None | None | None | None | N |
G/Y | 0.3897 | ambiguous | 0.2501 | benign | -1.293 | Destabilizing | 0.204 | N | 0.729 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.