Isoform Positions

Isoform Protein Position Transcript Position Chromosomal Position (HG38) Chromosomal Position (HG19)
IC1827255039;55040;55041 chr2:178602588;178602587;178602586chr2:179467315;179467314;179467313
N2AB1663150116;50117;50118 chr2:178602588;178602587;178602586chr2:179467315;179467314;179467313
N2A1570447335;47336;47337 chr2:178602588;178602587;178602586chr2:179467315;179467314;179467313
N2B920727844;27845;27846 chr2:178602588;178602587;178602586chr2:179467315;179467314;179467313
Novex-1933228219;28220;28221 chr2:178602588;178602587;178602586chr2:179467315;179467314;179467313
Novex-2939928420;28421;28422 chr2:178602588;178602587;178602586chr2:179467315;179467314;179467313
Novex-3NoneNone chr2:Nonechr2:None

Information

  • RefSeq wild type amino acid: P
  • RefSeq wild type transcript codon: CCA
  • RefSeq wild type template codon: GGT
  • Domain: Fn3-21
  • Domain position: 1
  • Structural Position: 1
  • Q(SASA): 0.6941
  • Predicted PPI site: I

Reported SAVs

SNV RS
DUET
PolyPhen-2
Condel
Rhapsody
REVEL
MVP
Source
MAF
Disease
Zygosity
Site annotation
mCSM PPI
Predicted PPI site
Comments
AFR
AMR
AMS
ASJ
EAS
EUR
FIN
MDE
NFE
SAS
OTH
P/L rs892008187 None 0.908 N 0.643 0.237 0.390842690916 gnomAD-4.0.0 7.44476E-07 None None None None I None 3.44661E-05 0 None 0 0 None 0 0 0 0 0
P/S None None 0.993 N 0.587 0.316 0.252162846088 gnomAD-4.0.0 3.99739E-06 None None None None I None 0 4.98703E-05 None 0 0 None 0 0 3.45149E-06 0 0

Saturation Mutagenesis

SAV
AlphaMissense (IC)
AlphaMissense Class (IC)
AlphaMissense (N2AB)
AlphaMissense Class (N2AB)
mCSM
mCSM class
PolyPhen-2
PolyPhen-2 Class
Rhapsody
Rhapsody Class
Condel
Condel Score
Site annotation
mCSM PPI
Predicted PPI site
P/A 0.1336 likely_benign 0.1024 benign -0.323 Destabilizing 0.908 D 0.556 neutral N 0.475073362 None None I
P/C 0.524 ambiguous 0.4038 ambiguous -0.559 Destabilizing 1.0 D 0.805 deleterious None None None None I
P/D 0.8516 likely_pathogenic 0.7574 pathogenic -0.002 Destabilizing 0.998 D 0.616 neutral None None None None I
P/E 0.4863 ambiguous 0.392 ambiguous -0.129 Destabilizing 0.995 D 0.611 neutral None None None None I
P/F 0.6906 likely_pathogenic 0.5478 ambiguous -0.733 Destabilizing 0.999 D 0.803 deleterious None None None None I
P/G 0.6519 likely_pathogenic 0.531 ambiguous -0.411 Destabilizing 0.995 D 0.585 neutral None None None None I
P/H 0.3978 ambiguous 0.2853 benign -0.093 Destabilizing 1.0 D 0.776 deleterious None None None None I
P/I 0.2172 likely_benign 0.1602 benign -0.251 Destabilizing 0.929 D 0.65 prob.neutral None None None None I
P/K 0.3123 likely_benign 0.2483 benign -0.087 Destabilizing 0.995 D 0.619 neutral None None None None I
P/L 0.1318 likely_benign 0.1006 benign -0.251 Destabilizing 0.908 D 0.643 neutral N 0.463934548 None None I
P/M 0.3929 ambiguous 0.3007 benign -0.207 Destabilizing 0.999 D 0.735 deleterious None None None None I
P/N 0.714 likely_pathogenic 0.5797 pathogenic 0.121 Stabilizing 0.998 D 0.781 deleterious None None None None I
P/Q 0.26 likely_benign 0.1849 benign -0.144 Destabilizing 0.998 D 0.584 neutral N 0.504488378 None None I
P/R 0.2312 likely_benign 0.1626 benign 0.348 Stabilizing 0.993 D 0.779 deleterious N 0.496219492 None None I
P/S 0.2873 likely_benign 0.209 benign -0.246 Destabilizing 0.993 D 0.587 neutral N 0.488839659 None None I
P/T 0.1848 likely_benign 0.1322 benign -0.275 Destabilizing 0.986 D 0.589 neutral N 0.514830726 None None I
P/V 0.1524 likely_benign 0.1136 benign -0.242 Destabilizing 0.075 N 0.371 neutral None None None None I
P/W 0.8665 likely_pathogenic 0.7547 pathogenic -0.79 Destabilizing 1.0 D 0.796 deleterious None None None None I
P/Y 0.6858 likely_pathogenic 0.551 ambiguous -0.448 Destabilizing 0.998 D 0.803 deleterious None None None None I

Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.