Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18278 | 55057;55058;55059 | chr2:178602570;178602569;178602568 | chr2:179467297;179467296;179467295 |
N2AB | 16637 | 50134;50135;50136 | chr2:178602570;178602569;178602568 | chr2:179467297;179467296;179467295 |
N2A | 15710 | 47353;47354;47355 | chr2:178602570;178602569;178602568 | chr2:179467297;179467296;179467295 |
N2B | 9213 | 27862;27863;27864 | chr2:178602570;178602569;178602568 | chr2:179467297;179467296;179467295 |
Novex-1 | 9338 | 28237;28238;28239 | chr2:178602570;178602569;178602568 | chr2:179467297;179467296;179467295 |
Novex-2 | 9405 | 28438;28439;28440 | chr2:178602570;178602569;178602568 | chr2:179467297;179467296;179467295 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/F | rs1213616804 | -0.433 | 0.295 | N | 0.344 | 0.195 | 0.508455578974 | gnomAD-4.0.0 | 2.16261E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.78975E-06 | 0 | 0 |
C/R | rs2053721931 | None | None | N | 0.251 | 0.127 | 0.346085882481 | gnomAD-4.0.0 | 1.78027E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.94204E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2333 | likely_benign | 0.1778 | benign | -1.044 | Destabilizing | None | N | 0.063 | neutral | None | None | None | None | N |
C/D | 0.4734 | ambiguous | 0.3529 | ambiguous | -0.328 | Destabilizing | 0.072 | N | 0.397 | neutral | None | None | None | None | N |
C/E | 0.5055 | ambiguous | 0.4078 | ambiguous | -0.3 | Destabilizing | 0.038 | N | 0.369 | neutral | None | None | None | None | N |
C/F | 0.1584 | likely_benign | 0.1159 | benign | -1.009 | Destabilizing | 0.295 | N | 0.344 | neutral | N | 0.418701383 | None | None | N |
C/G | 0.1682 | likely_benign | 0.1173 | benign | -1.253 | Destabilizing | 0.012 | N | 0.285 | neutral | N | 0.376505257 | None | None | N |
C/H | 0.2284 | likely_benign | 0.1696 | benign | -1.612 | Destabilizing | 0.356 | N | 0.31 | neutral | None | None | None | None | N |
C/I | 0.3203 | likely_benign | 0.2384 | benign | -0.556 | Destabilizing | 0.038 | N | 0.302 | neutral | None | None | None | None | N |
C/K | 0.3428 | ambiguous | 0.2731 | benign | -0.261 | Destabilizing | 0.038 | N | 0.344 | neutral | None | None | None | None | N |
C/L | 0.2405 | likely_benign | 0.2032 | benign | -0.556 | Destabilizing | 0.016 | N | 0.326 | neutral | None | None | None | None | N |
C/M | 0.4027 | ambiguous | 0.3704 | ambiguous | -0.125 | Destabilizing | 0.356 | N | 0.341 | neutral | None | None | None | None | N |
C/N | 0.2693 | likely_benign | 0.2147 | benign | -0.128 | Destabilizing | 0.072 | N | 0.386 | neutral | None | None | None | None | N |
C/P | 0.6218 | likely_pathogenic | 0.3802 | ambiguous | -0.693 | Destabilizing | 0.136 | N | 0.403 | neutral | None | None | None | None | N |
C/Q | 0.259 | likely_benign | 0.198 | benign | -0.261 | Destabilizing | 0.214 | N | 0.399 | neutral | None | None | None | None | N |
C/R | 0.1598 | likely_benign | 0.118 | benign | -0.161 | Destabilizing | None | N | 0.251 | neutral | N | 0.38597289 | None | None | N |
C/S | 0.186 | likely_benign | 0.132 | benign | -0.506 | Destabilizing | 0.012 | N | 0.333 | neutral | N | 0.381201788 | None | None | N |
C/T | 0.2837 | likely_benign | 0.2155 | benign | -0.332 | Destabilizing | None | N | 0.143 | neutral | None | None | None | None | N |
C/V | 0.2665 | likely_benign | 0.216 | benign | -0.693 | Destabilizing | 0.016 | N | 0.278 | neutral | None | None | None | None | N |
C/W | 0.3821 | ambiguous | 0.2874 | benign | -1.033 | Destabilizing | 0.828 | D | 0.308 | neutral | N | 0.45927857 | None | None | N |
C/Y | 0.1843 | likely_benign | 0.1376 | benign | -0.856 | Destabilizing | 0.295 | N | 0.319 | neutral | N | 0.477786972 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.