Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18280 | 55063;55064;55065 | chr2:178602564;178602563;178602562 | chr2:179467291;179467290;179467289 |
N2AB | 16639 | 50140;50141;50142 | chr2:178602564;178602563;178602562 | chr2:179467291;179467290;179467289 |
N2A | 15712 | 47359;47360;47361 | chr2:178602564;178602563;178602562 | chr2:179467291;179467290;179467289 |
N2B | 9215 | 27868;27869;27870 | chr2:178602564;178602563;178602562 | chr2:179467291;179467290;179467289 |
Novex-1 | 9340 | 28243;28244;28245 | chr2:178602564;178602563;178602562 | chr2:179467291;179467290;179467289 |
Novex-2 | 9407 | 28444;28445;28446 | chr2:178602564;178602563;178602562 | chr2:179467291;179467290;179467289 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs904716065 | None | 0.939 | N | 0.588 | 0.196 | 0.324161360171 | gnomAD-4.0.0 | 1.42187E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.84541E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1742 | likely_benign | 0.1271 | benign | -0.609 | Destabilizing | 0.939 | D | 0.639 | neutral | D | 0.522828616 | None | None | N |
E/C | 0.8094 | likely_pathogenic | 0.6967 | pathogenic | -0.271 | Destabilizing | 0.999 | D | 0.78 | deleterious | None | None | None | None | N |
E/D | 0.1996 | likely_benign | 0.1425 | benign | -0.681 | Destabilizing | 0.046 | N | 0.355 | neutral | N | 0.515190567 | None | None | N |
E/F | 0.7132 | likely_pathogenic | 0.5962 | pathogenic | -0.261 | Destabilizing | 0.993 | D | 0.778 | deleterious | None | None | None | None | N |
E/G | 0.2912 | likely_benign | 0.2116 | benign | -0.886 | Destabilizing | 0.939 | D | 0.673 | neutral | N | 0.471711179 | None | None | N |
E/H | 0.4784 | ambiguous | 0.3686 | ambiguous | -0.266 | Destabilizing | 0.999 | D | 0.599 | neutral | None | None | None | None | N |
E/I | 0.2472 | likely_benign | 0.1812 | benign | 0.113 | Stabilizing | 0.973 | D | 0.731 | prob.delet. | None | None | None | None | N |
E/K | 0.1821 | likely_benign | 0.1465 | benign | -0.158 | Destabilizing | 0.939 | D | 0.588 | neutral | N | 0.475053312 | None | None | N |
E/L | 0.3912 | ambiguous | 0.2696 | benign | 0.113 | Stabilizing | 0.91 | D | 0.687 | prob.neutral | None | None | None | None | N |
E/M | 0.4218 | ambiguous | 0.321 | benign | 0.32 | Stabilizing | 0.998 | D | 0.759 | deleterious | None | None | None | None | N |
E/N | 0.3393 | likely_benign | 0.2305 | benign | -0.543 | Destabilizing | 0.973 | D | 0.615 | neutral | None | None | None | None | N |
E/P | 0.9557 | likely_pathogenic | 0.9182 | pathogenic | -0.106 | Destabilizing | 0.993 | D | 0.755 | deleterious | None | None | None | None | N |
E/Q | 0.1497 | likely_benign | 0.1167 | benign | -0.467 | Destabilizing | 0.991 | D | 0.611 | neutral | N | 0.479325768 | None | None | N |
E/R | 0.2885 | likely_benign | 0.2307 | benign | 0.127 | Stabilizing | 0.993 | D | 0.631 | neutral | None | None | None | None | N |
E/S | 0.2458 | likely_benign | 0.1717 | benign | -0.752 | Destabilizing | 0.953 | D | 0.597 | neutral | None | None | None | None | N |
E/T | 0.1953 | likely_benign | 0.1447 | benign | -0.53 | Destabilizing | 0.953 | D | 0.696 | prob.neutral | None | None | None | None | N |
E/V | 0.1363 | likely_benign | 0.1044 | benign | -0.106 | Destabilizing | 0.322 | N | 0.407 | neutral | N | 0.486022454 | None | None | N |
E/W | 0.905 | likely_pathogenic | 0.8393 | pathogenic | -0.047 | Destabilizing | 0.999 | D | 0.733 | prob.delet. | None | None | None | None | N |
E/Y | 0.6543 | likely_pathogenic | 0.5077 | ambiguous | -0.019 | Destabilizing | 0.998 | D | 0.783 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.