Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18288 | 55087;55088;55089 | chr2:178602540;178602539;178602538 | chr2:179467267;179467266;179467265 |
N2AB | 16647 | 50164;50165;50166 | chr2:178602540;178602539;178602538 | chr2:179467267;179467266;179467265 |
N2A | 15720 | 47383;47384;47385 | chr2:178602540;178602539;178602538 | chr2:179467267;179467266;179467265 |
N2B | 9223 | 27892;27893;27894 | chr2:178602540;178602539;178602538 | chr2:179467267;179467266;179467265 |
Novex-1 | 9348 | 28267;28268;28269 | chr2:178602540;178602539;178602538 | chr2:179467267;179467266;179467265 |
Novex-2 | 9415 | 28468;28469;28470 | chr2:178602540;178602539;178602538 | chr2:179467267;179467266;179467265 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/C | None | None | 0.965 | N | 0.694 | 0.349 | 0.467161347466 | gnomAD-4.0.0 | 6.94182E-07 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 9.08371E-07 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.2984 | likely_benign | 0.2182 | benign | -0.802 | Destabilizing | 0.218 | N | 0.499 | neutral | None | None | None | None | N |
S/C | 0.2998 | likely_benign | 0.1979 | benign | -0.894 | Destabilizing | 0.965 | D | 0.694 | prob.neutral | N | 0.485902912 | None | None | N |
S/D | 0.8857 | likely_pathogenic | 0.7854 | pathogenic | -1.177 | Destabilizing | 0.404 | N | 0.531 | neutral | None | None | None | None | N |
S/E | 0.9048 | likely_pathogenic | 0.8544 | pathogenic | -1.139 | Destabilizing | 0.575 | D | 0.541 | neutral | None | None | None | None | N |
S/F | 0.6413 | likely_pathogenic | 0.4073 | ambiguous | -1.062 | Destabilizing | 0.906 | D | 0.772 | deleterious | None | None | None | None | N |
S/G | 0.334 | likely_benign | 0.2222 | benign | -1.047 | Destabilizing | 0.505 | D | 0.532 | neutral | N | 0.481508365 | None | None | N |
S/H | 0.6691 | likely_pathogenic | 0.5369 | ambiguous | -1.539 | Destabilizing | 0.973 | D | 0.704 | prob.neutral | None | None | None | None | N |
S/I | 0.7909 | likely_pathogenic | 0.5956 | pathogenic | -0.245 | Destabilizing | 0.642 | D | 0.755 | deleterious | D | 0.523503774 | None | None | N |
S/K | 0.9587 | likely_pathogenic | 0.9144 | pathogenic | -0.712 | Destabilizing | 0.575 | D | 0.543 | neutral | None | None | None | None | N |
S/L | 0.4695 | ambiguous | 0.2819 | benign | -0.245 | Destabilizing | 0.404 | N | 0.662 | neutral | None | None | None | None | N |
S/M | 0.5218 | ambiguous | 0.3612 | ambiguous | -0.021 | Destabilizing | 0.973 | D | 0.697 | prob.neutral | None | None | None | None | N |
S/N | 0.5297 | ambiguous | 0.3394 | benign | -0.935 | Destabilizing | 0.013 | N | 0.378 | neutral | N | 0.497548705 | None | None | N |
S/P | 0.9953 | likely_pathogenic | 0.9881 | pathogenic | -0.399 | Destabilizing | 0.906 | D | 0.719 | prob.delet. | None | None | None | None | N |
S/Q | 0.8466 | likely_pathogenic | 0.7737 | pathogenic | -1.127 | Destabilizing | 0.906 | D | 0.575 | neutral | None | None | None | None | N |
S/R | 0.9339 | likely_pathogenic | 0.866 | pathogenic | -0.624 | Destabilizing | 0.782 | D | 0.721 | prob.delet. | N | 0.482736133 | None | None | N |
S/T | 0.1279 | likely_benign | 0.0846 | benign | -0.825 | Destabilizing | 0.001 | N | 0.203 | neutral | N | 0.502632276 | None | None | N |
S/V | 0.6823 | likely_pathogenic | 0.4859 | ambiguous | -0.399 | Destabilizing | 0.404 | N | 0.669 | neutral | None | None | None | None | N |
S/W | 0.7831 | likely_pathogenic | 0.6392 | pathogenic | -1.085 | Destabilizing | 0.991 | D | 0.762 | deleterious | None | None | None | None | N |
S/Y | 0.5584 | ambiguous | 0.3846 | ambiguous | -0.75 | Destabilizing | 0.906 | D | 0.77 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.