Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18289 | 55090;55091;55092 | chr2:178602537;178602536;178602535 | chr2:179467264;179467263;179467262 |
N2AB | 16648 | 50167;50168;50169 | chr2:178602537;178602536;178602535 | chr2:179467264;179467263;179467262 |
N2A | 15721 | 47386;47387;47388 | chr2:178602537;178602536;178602535 | chr2:179467264;179467263;179467262 |
N2B | 9224 | 27895;27896;27897 | chr2:178602537;178602536;178602535 | chr2:179467264;179467263;179467262 |
Novex-1 | 9349 | 28270;28271;28272 | chr2:178602537;178602536;178602535 | chr2:179467264;179467263;179467262 |
Novex-2 | 9416 | 28471;28472;28473 | chr2:178602537;178602536;178602535 | chr2:179467264;179467263;179467262 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.81 | D | 0.672 | 0.193 | 0.434272847907 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
I/T | None | None | 0.549 | N | 0.727 | 0.411 | 0.598386477769 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.8303 | likely_pathogenic | 0.739 | pathogenic | -2.741 | Highly Destabilizing | 0.25 | N | 0.617 | neutral | None | None | None | None | N |
I/C | 0.8888 | likely_pathogenic | 0.8396 | pathogenic | -2.373 | Highly Destabilizing | 0.977 | D | 0.784 | deleterious | None | None | None | None | N |
I/D | 0.9977 | likely_pathogenic | 0.997 | pathogenic | -3.057 | Highly Destabilizing | 0.972 | D | 0.81 | deleterious | None | None | None | None | N |
I/E | 0.994 | likely_pathogenic | 0.9934 | pathogenic | -2.739 | Highly Destabilizing | 0.92 | D | 0.802 | deleterious | None | None | None | None | N |
I/F | 0.632 | likely_pathogenic | 0.5304 | ambiguous | -1.668 | Destabilizing | 0.81 | D | 0.724 | prob.delet. | N | 0.489512719 | None | None | N |
I/G | 0.9864 | likely_pathogenic | 0.9735 | pathogenic | -3.375 | Highly Destabilizing | 0.766 | D | 0.779 | deleterious | None | None | None | None | N |
I/H | 0.9893 | likely_pathogenic | 0.9823 | pathogenic | -3.011 | Highly Destabilizing | 0.992 | D | 0.787 | deleterious | None | None | None | None | N |
I/K | 0.9894 | likely_pathogenic | 0.9877 | pathogenic | -2.037 | Highly Destabilizing | 0.92 | D | 0.803 | deleterious | None | None | None | None | N |
I/L | 0.2994 | likely_benign | 0.2285 | benign | -0.852 | Destabilizing | 0.045 | N | 0.515 | neutral | N | 0.475319883 | None | None | N |
I/M | 0.3843 | ambiguous | 0.3507 | ambiguous | -1.18 | Destabilizing | 0.81 | D | 0.672 | neutral | D | 0.523754123 | None | None | N |
I/N | 0.9697 | likely_pathogenic | 0.9621 | pathogenic | -2.651 | Highly Destabilizing | 0.963 | D | 0.815 | deleterious | N | 0.515178299 | None | None | N |
I/P | 0.9965 | likely_pathogenic | 0.9941 | pathogenic | -1.47 | Destabilizing | 0.972 | D | 0.814 | deleterious | None | None | None | None | N |
I/Q | 0.9869 | likely_pathogenic | 0.9843 | pathogenic | -2.317 | Highly Destabilizing | 0.972 | D | 0.809 | deleterious | None | None | None | None | N |
I/R | 0.9779 | likely_pathogenic | 0.971 | pathogenic | -2.079 | Highly Destabilizing | 0.92 | D | 0.812 | deleterious | None | None | None | None | N |
I/S | 0.9323 | likely_pathogenic | 0.907 | pathogenic | -3.377 | Highly Destabilizing | 0.549 | D | 0.767 | deleterious | N | 0.503150431 | None | None | N |
I/T | 0.9173 | likely_pathogenic | 0.8625 | pathogenic | -2.877 | Highly Destabilizing | 0.549 | D | 0.727 | prob.delet. | N | 0.502896941 | None | None | N |
I/V | 0.0953 | likely_benign | 0.0738 | benign | -1.47 | Destabilizing | 0.001 | N | 0.19 | neutral | N | 0.404193291 | None | None | N |
I/W | 0.9914 | likely_pathogenic | 0.987 | pathogenic | -1.997 | Destabilizing | 0.992 | D | 0.785 | deleterious | None | None | None | None | N |
I/Y | 0.9521 | likely_pathogenic | 0.9321 | pathogenic | -1.765 | Destabilizing | 0.92 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.