Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18290 | 55093;55094;55095 | chr2:178602534;178602533;178602532 | chr2:179467261;179467260;179467259 |
N2AB | 16649 | 50170;50171;50172 | chr2:178602534;178602533;178602532 | chr2:179467261;179467260;179467259 |
N2A | 15722 | 47389;47390;47391 | chr2:178602534;178602533;178602532 | chr2:179467261;179467260;179467259 |
N2B | 9225 | 27898;27899;27900 | chr2:178602534;178602533;178602532 | chr2:179467261;179467260;179467259 |
Novex-1 | 9350 | 28273;28274;28275 | chr2:178602534;178602533;178602532 | chr2:179467261;179467260;179467259 |
Novex-2 | 9417 | 28474;28475;28476 | chr2:178602534;178602533;178602532 | chr2:179467261;179467260;179467259 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/L | None | None | 0.062 | N | 0.567 | 0.317 | 0.426551566703 | gnomAD-4.0.0 | 1.62226E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.9099E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
S/A | 0.1436 | likely_benign | 0.1058 | benign | -0.698 | Destabilizing | None | N | 0.275 | neutral | N | 0.502685417 | None | None | N |
S/C | 0.1387 | likely_benign | 0.1157 | benign | -0.632 | Destabilizing | 0.824 | D | 0.585 | neutral | None | None | None | None | N |
S/D | 0.666 | likely_pathogenic | 0.539 | ambiguous | -0.691 | Destabilizing | 0.149 | N | 0.541 | neutral | None | None | None | None | N |
S/E | 0.7493 | likely_pathogenic | 0.6333 | pathogenic | -0.659 | Destabilizing | 0.149 | N | 0.543 | neutral | None | None | None | None | N |
S/F | 0.2914 | likely_benign | 0.169 | benign | -0.768 | Destabilizing | 0.555 | D | 0.627 | neutral | None | None | None | None | N |
S/G | 0.2339 | likely_benign | 0.1582 | benign | -0.979 | Destabilizing | 0.035 | N | 0.487 | neutral | None | None | None | None | N |
S/H | 0.4146 | ambiguous | 0.3303 | benign | -1.447 | Destabilizing | 0.935 | D | 0.585 | neutral | None | None | None | None | N |
S/I | 0.2377 | likely_benign | 0.1545 | benign | -0.05 | Destabilizing | 0.235 | N | 0.611 | neutral | None | None | None | None | N |
S/K | 0.8352 | likely_pathogenic | 0.7289 | pathogenic | -0.747 | Destabilizing | 0.149 | N | 0.535 | neutral | None | None | None | None | N |
S/L | 0.1394 | likely_benign | 0.0988 | benign | -0.05 | Destabilizing | 0.062 | N | 0.567 | neutral | N | 0.474152021 | None | None | N |
S/M | 0.2447 | likely_benign | 0.1791 | benign | 0.178 | Stabilizing | 0.555 | D | 0.591 | neutral | None | None | None | None | N |
S/N | 0.2888 | likely_benign | 0.1939 | benign | -0.855 | Destabilizing | 0.149 | N | 0.567 | neutral | None | None | None | None | N |
S/P | 0.9277 | likely_pathogenic | 0.8567 | pathogenic | -0.231 | Destabilizing | 0.484 | N | 0.592 | neutral | N | 0.486981505 | None | None | N |
S/Q | 0.6646 | likely_pathogenic | 0.5388 | ambiguous | -0.982 | Destabilizing | 0.555 | D | 0.577 | neutral | None | None | None | None | N |
S/R | 0.7656 | likely_pathogenic | 0.6443 | pathogenic | -0.686 | Destabilizing | 0.38 | N | 0.606 | neutral | None | None | None | None | N |
S/T | 0.0796 | likely_benign | 0.0625 | benign | -0.794 | Destabilizing | None | N | 0.28 | neutral | N | 0.437132429 | None | None | N |
S/V | 0.244 | likely_benign | 0.1656 | benign | -0.231 | Destabilizing | 0.081 | N | 0.567 | neutral | None | None | None | None | N |
S/W | 0.4515 | ambiguous | 0.3693 | ambiguous | -0.781 | Destabilizing | 0.935 | D | 0.675 | neutral | None | None | None | None | N |
S/Y | 0.2563 | likely_benign | 0.1854 | benign | -0.487 | Destabilizing | 0.555 | D | 0.615 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.