Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18294 | 55105;55106;55107 | chr2:178602522;178602521;178602520 | chr2:179467249;179467248;179467247 |
N2AB | 16653 | 50182;50183;50184 | chr2:178602522;178602521;178602520 | chr2:179467249;179467248;179467247 |
N2A | 15726 | 47401;47402;47403 | chr2:178602522;178602521;178602520 | chr2:179467249;179467248;179467247 |
N2B | 9229 | 27910;27911;27912 | chr2:178602522;178602521;178602520 | chr2:179467249;179467248;179467247 |
Novex-1 | 9354 | 28285;28286;28287 | chr2:178602522;178602521;178602520 | chr2:179467249;179467248;179467247 |
Novex-2 | 9421 | 28486;28487;28488 | chr2:178602522;178602521;178602520 | chr2:179467249;179467248;179467247 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/N | rs770482704 | 0.157 | 0.961 | N | 0.609 | 0.223 | 0.173771789658 | gnomAD-2.1.1 | 4.16E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 9.27E-06 | 0 |
K/N | rs770482704 | 0.157 | 0.961 | N | 0.609 | 0.223 | 0.173771789658 | gnomAD-4.0.0 | 1.37286E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.80289E-06 | 0 | 0 |
K/T | None | None | 0.248 | N | 0.32 | 0.179 | 0.218112801441 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3754 | ambiguous | 0.2951 | benign | -0.068 | Destabilizing | 0.97 | D | 0.615 | neutral | None | None | None | None | I |
K/C | 0.6586 | likely_pathogenic | 0.5867 | pathogenic | -0.149 | Destabilizing | 1.0 | D | 0.749 | deleterious | None | None | None | None | I |
K/D | 0.6084 | likely_pathogenic | 0.5616 | ambiguous | 0.046 | Stabilizing | 0.092 | N | 0.311 | neutral | None | None | None | None | I |
K/E | 0.2363 | likely_benign | 0.1792 | benign | 0.073 | Stabilizing | 0.925 | D | 0.594 | neutral | N | 0.456603624 | None | None | I |
K/F | 0.7169 | likely_pathogenic | 0.6353 | pathogenic | -0.127 | Destabilizing | 0.999 | D | 0.745 | deleterious | None | None | None | None | I |
K/G | 0.4616 | ambiguous | 0.4037 | ambiguous | -0.316 | Destabilizing | 0.985 | D | 0.627 | neutral | None | None | None | None | I |
K/H | 0.3354 | likely_benign | 0.2806 | benign | -0.663 | Destabilizing | 1.0 | D | 0.685 | prob.neutral | None | None | None | None | I |
K/I | 0.3077 | likely_benign | 0.2397 | benign | 0.518 | Stabilizing | 0.989 | D | 0.751 | deleterious | N | 0.478675194 | None | None | I |
K/L | 0.2986 | likely_benign | 0.2355 | benign | 0.518 | Stabilizing | 0.97 | D | 0.647 | neutral | None | None | None | None | I |
K/M | 0.1962 | likely_benign | 0.1576 | benign | 0.303 | Stabilizing | 1.0 | D | 0.691 | prob.neutral | None | None | None | None | I |
K/N | 0.3664 | ambiguous | 0.307 | benign | 0.179 | Stabilizing | 0.961 | D | 0.609 | neutral | N | 0.415413149 | None | None | I |
K/P | 0.8866 | likely_pathogenic | 0.8383 | pathogenic | 0.352 | Stabilizing | 0.999 | D | 0.716 | prob.delet. | None | None | None | None | I |
K/Q | 0.1455 | likely_benign | 0.1184 | benign | 0.02 | Stabilizing | 0.994 | D | 0.654 | neutral | N | 0.468130126 | None | None | I |
K/R | 0.1122 | likely_benign | 0.1017 | benign | -0.174 | Destabilizing | 0.98 | D | 0.593 | neutral | N | 0.453470105 | None | None | I |
K/S | 0.3859 | ambiguous | 0.3072 | benign | -0.321 | Destabilizing | 0.942 | D | 0.569 | neutral | None | None | None | None | I |
K/T | 0.1703 | likely_benign | 0.13 | benign | -0.133 | Destabilizing | 0.248 | N | 0.32 | neutral | N | 0.439980733 | None | None | I |
K/V | 0.2888 | likely_benign | 0.2291 | benign | 0.352 | Stabilizing | 0.991 | D | 0.661 | neutral | None | None | None | None | I |
K/W | 0.8135 | likely_pathogenic | 0.7482 | pathogenic | -0.109 | Destabilizing | 1.0 | D | 0.728 | prob.delet. | None | None | None | None | I |
K/Y | 0.6049 | likely_pathogenic | 0.5239 | ambiguous | 0.219 | Stabilizing | 0.999 | D | 0.76 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.