Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18303 | 55132;55133;55134 | chr2:178602495;178602494;178602493 | chr2:179467222;179467221;179467220 |
N2AB | 16662 | 50209;50210;50211 | chr2:178602495;178602494;178602493 | chr2:179467222;179467221;179467220 |
N2A | 15735 | 47428;47429;47430 | chr2:178602495;178602494;178602493 | chr2:179467222;179467221;179467220 |
N2B | 9238 | 27937;27938;27939 | chr2:178602495;178602494;178602493 | chr2:179467222;179467221;179467220 |
Novex-1 | 9363 | 28312;28313;28314 | chr2:178602495;178602494;178602493 | chr2:179467222;179467221;179467220 |
Novex-2 | 9430 | 28513;28514;28515 | chr2:178602495;178602494;178602493 | chr2:179467222;179467221;179467220 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/L | None | None | 0.085 | N | 0.517 | 0.439 | 0.560834375986 | gnomAD-4.0.0 | 3.19368E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.73418E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
P/A | 0.069 | likely_benign | 0.0701 | benign | -0.593 | Destabilizing | 0.928 | D | 0.574 | neutral | N | 0.471194655 | None | None | I |
P/C | 0.4175 | ambiguous | 0.4146 | ambiguous | -0.54 | Destabilizing | 0.999 | D | 0.639 | neutral | None | None | None | None | I |
P/D | 0.3408 | ambiguous | 0.3111 | benign | -0.376 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | None | None | None | None | I |
P/E | 0.2187 | likely_benign | 0.197 | benign | -0.498 | Destabilizing | 0.992 | D | 0.7 | prob.neutral | None | None | None | None | I |
P/F | 0.4248 | ambiguous | 0.4483 | ambiguous | -0.85 | Destabilizing | 0.991 | D | 0.658 | neutral | None | None | None | None | I |
P/G | 0.2767 | likely_benign | 0.287 | benign | -0.735 | Destabilizing | 0.992 | D | 0.709 | prob.delet. | None | None | None | None | I |
P/H | 0.1679 | likely_benign | 0.1695 | benign | -0.321 | Destabilizing | 0.999 | D | 0.648 | neutral | None | None | None | None | I |
P/I | 0.2311 | likely_benign | 0.2278 | benign | -0.37 | Destabilizing | 0.968 | D | 0.672 | neutral | None | None | None | None | I |
P/K | 0.1876 | likely_benign | 0.1731 | benign | -0.431 | Destabilizing | 0.992 | D | 0.711 | prob.delet. | None | None | None | None | I |
P/L | 0.1094 | likely_benign | 0.1126 | benign | -0.37 | Destabilizing | 0.085 | N | 0.517 | neutral | N | 0.514368605 | None | None | I |
P/M | 0.2652 | likely_benign | 0.2565 | benign | -0.261 | Destabilizing | 0.996 | D | 0.651 | neutral | None | None | None | None | I |
P/N | 0.279 | likely_benign | 0.2559 | benign | -0.101 | Destabilizing | 0.997 | D | 0.7 | prob.neutral | None | None | None | None | I |
P/Q | 0.1254 | likely_benign | 0.1243 | benign | -0.392 | Destabilizing | 0.996 | D | 0.685 | prob.neutral | N | 0.493755908 | None | None | I |
P/R | 0.131 | likely_benign | 0.1253 | benign | 0.125 | Stabilizing | 0.989 | D | 0.701 | prob.neutral | N | 0.491718446 | None | None | I |
P/S | 0.1161 | likely_benign | 0.1182 | benign | -0.479 | Destabilizing | 0.989 | D | 0.697 | prob.neutral | N | 0.488805157 | None | None | I |
P/T | 0.0968 | likely_benign | 0.0963 | benign | -0.502 | Destabilizing | 0.978 | D | 0.655 | neutral | N | 0.491527409 | None | None | I |
P/V | 0.1558 | likely_benign | 0.15 | benign | -0.409 | Destabilizing | 0.968 | D | 0.627 | neutral | None | None | None | None | I |
P/W | 0.6155 | likely_pathogenic | 0.5994 | pathogenic | -0.907 | Destabilizing | 0.999 | D | 0.673 | neutral | None | None | None | None | I |
P/Y | 0.4038 | ambiguous | 0.3985 | ambiguous | -0.606 | Destabilizing | 0.998 | D | 0.643 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.