Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18312 | 55159;55160;55161 | chr2:178602468;178602467;178602466 | chr2:179467195;179467194;179467193 |
N2AB | 16671 | 50236;50237;50238 | chr2:178602468;178602467;178602466 | chr2:179467195;179467194;179467193 |
N2A | 15744 | 47455;47456;47457 | chr2:178602468;178602467;178602466 | chr2:179467195;179467194;179467193 |
N2B | 9247 | 27964;27965;27966 | chr2:178602468;178602467;178602466 | chr2:179467195;179467194;179467193 |
Novex-1 | 9372 | 28339;28340;28341 | chr2:178602468;178602467;178602466 | chr2:179467195;179467194;179467193 |
Novex-2 | 9439 | 28540;28541;28542 | chr2:178602468;178602467;178602466 | chr2:179467195;179467194;179467193 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/R | rs754977491 | -1.107 | 0.997 | N | 0.502 | 0.415 | 0.231231049324 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
Q/R | rs754977491 | -1.107 | 0.997 | N | 0.502 | 0.415 | 0.231231049324 | gnomAD-4.0.0 | 1.59458E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86325E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.408 | ambiguous | 0.4087 | ambiguous | -1.08 | Destabilizing | 0.997 | D | 0.563 | neutral | None | None | None | None | N |
Q/C | 0.7079 | likely_pathogenic | 0.6913 | pathogenic | -0.593 | Destabilizing | 1.0 | D | 0.859 | deleterious | None | None | None | None | N |
Q/D | 0.9399 | likely_pathogenic | 0.9506 | pathogenic | -1.903 | Destabilizing | 0.997 | D | 0.505 | neutral | None | None | None | None | N |
Q/E | 0.2071 | likely_benign | 0.1864 | benign | -1.644 | Destabilizing | 0.992 | D | 0.441 | neutral | N | 0.452160596 | None | None | N |
Q/F | 0.9134 | likely_pathogenic | 0.9341 | pathogenic | -0.56 | Destabilizing | 0.999 | D | 0.877 | deleterious | None | None | None | None | N |
Q/G | 0.6212 | likely_pathogenic | 0.6518 | pathogenic | -1.517 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | None | None | None | None | N |
Q/H | 0.7209 | likely_pathogenic | 0.7398 | pathogenic | -1.226 | Destabilizing | 0.999 | D | 0.704 | prob.neutral | N | 0.475173529 | None | None | N |
Q/I | 0.7462 | likely_pathogenic | 0.7078 | pathogenic | 0.106 | Stabilizing | 0.999 | D | 0.873 | deleterious | None | None | None | None | N |
Q/K | 0.2339 | likely_benign | 0.1858 | benign | -0.542 | Destabilizing | 0.997 | D | 0.503 | neutral | N | 0.395363164 | None | None | N |
Q/L | 0.302 | likely_benign | 0.2474 | benign | 0.106 | Stabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.479693914 | None | None | N |
Q/M | 0.4247 | ambiguous | 0.3972 | ambiguous | 0.298 | Stabilizing | 0.999 | D | 0.709 | prob.delet. | None | None | None | None | N |
Q/N | 0.81 | likely_pathogenic | 0.8371 | pathogenic | -1.336 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
Q/P | 0.959 | likely_pathogenic | 0.9619 | pathogenic | -0.263 | Destabilizing | 0.999 | D | 0.749 | deleterious | N | 0.482208565 | None | None | N |
Q/R | 0.2417 | likely_benign | 0.203 | benign | -0.718 | Destabilizing | 0.997 | D | 0.502 | neutral | N | 0.368080562 | None | None | N |
Q/S | 0.686 | likely_pathogenic | 0.7104 | pathogenic | -1.565 | Destabilizing | 0.997 | D | 0.466 | neutral | None | None | None | None | N |
Q/T | 0.6355 | likely_pathogenic | 0.5763 | pathogenic | -1.12 | Destabilizing | 0.999 | D | 0.703 | prob.neutral | None | None | None | None | N |
Q/V | 0.5451 | ambiguous | 0.4942 | ambiguous | -0.263 | Destabilizing | 0.999 | D | 0.761 | deleterious | None | None | None | None | N |
Q/W | 0.9055 | likely_pathogenic | 0.9099 | pathogenic | -0.639 | Destabilizing | 1.0 | D | 0.843 | deleterious | None | None | None | None | N |
Q/Y | 0.8582 | likely_pathogenic | 0.8796 | pathogenic | -0.252 | Destabilizing | 0.999 | D | 0.808 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.