Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18313 | 55162;55163;55164 | chr2:178602465;178602464;178602463 | chr2:179467192;179467191;179467190 |
N2AB | 16672 | 50239;50240;50241 | chr2:178602465;178602464;178602463 | chr2:179467192;179467191;179467190 |
N2A | 15745 | 47458;47459;47460 | chr2:178602465;178602464;178602463 | chr2:179467192;179467191;179467190 |
N2B | 9248 | 27967;27968;27969 | chr2:178602465;178602464;178602463 | chr2:179467192;179467191;179467190 |
Novex-1 | 9373 | 28342;28343;28344 | chr2:178602465;178602464;178602463 | chr2:179467192;179467191;179467190 |
Novex-2 | 9440 | 28543;28544;28545 | chr2:178602465;178602464;178602463 | chr2:179467192;179467191;179467190 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/D | rs751397444 | -1.152 | 0.004 | N | 0.129 | 0.01 | 0.124217242631 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.93E-06 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1976 | likely_benign | 0.1884 | benign | -0.756 | Destabilizing | 0.896 | D | 0.521 | neutral | N | 0.477675888 | None | None | N |
E/C | 0.8482 | likely_pathogenic | 0.8705 | pathogenic | -0.47 | Destabilizing | 0.999 | D | 0.747 | deleterious | None | None | None | None | N |
E/D | 0.1922 | likely_benign | 0.2315 | benign | -1.138 | Destabilizing | 0.004 | N | 0.129 | neutral | N | 0.468727559 | None | None | N |
E/F | 0.8327 | likely_pathogenic | 0.8637 | pathogenic | -0.236 | Destabilizing | 0.996 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/G | 0.2481 | likely_benign | 0.2858 | benign | -1.129 | Destabilizing | 0.896 | D | 0.565 | neutral | N | 0.477866926 | None | None | N |
E/H | 0.6877 | likely_pathogenic | 0.7202 | pathogenic | -0.634 | Destabilizing | 0.996 | D | 0.555 | neutral | None | None | None | None | N |
E/I | 0.4071 | ambiguous | 0.3871 | ambiguous | 0.26 | Stabilizing | 0.988 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/K | 0.2944 | likely_benign | 0.275 | benign | -0.773 | Destabilizing | 0.896 | D | 0.477 | neutral | N | 0.491929706 | None | None | N |
E/L | 0.4194 | ambiguous | 0.4031 | ambiguous | 0.26 | Stabilizing | 0.988 | D | 0.683 | prob.neutral | None | None | None | None | N |
E/M | 0.4935 | ambiguous | 0.4757 | ambiguous | 0.68 | Stabilizing | 0.999 | D | 0.702 | prob.neutral | None | None | None | None | N |
E/N | 0.4224 | ambiguous | 0.4863 | ambiguous | -1.155 | Destabilizing | 0.851 | D | 0.487 | neutral | None | None | None | None | N |
E/P | 0.459 | ambiguous | 0.4484 | ambiguous | -0.057 | Destabilizing | 0.988 | D | 0.583 | neutral | None | None | None | None | N |
E/Q | 0.226 | likely_benign | 0.2134 | benign | -0.991 | Destabilizing | 0.946 | D | 0.483 | neutral | N | 0.467013918 | None | None | N |
E/R | 0.4434 | ambiguous | 0.4381 | ambiguous | -0.527 | Destabilizing | 0.988 | D | 0.542 | neutral | None | None | None | None | N |
E/S | 0.3347 | likely_benign | 0.3763 | ambiguous | -1.471 | Destabilizing | 0.919 | D | 0.463 | neutral | None | None | None | None | N |
E/T | 0.341 | ambiguous | 0.3438 | ambiguous | -1.167 | Destabilizing | 0.959 | D | 0.534 | neutral | None | None | None | None | N |
E/V | 0.2249 | likely_benign | 0.2129 | benign | -0.057 | Destabilizing | 0.984 | D | 0.601 | neutral | N | 0.481816945 | None | None | N |
E/W | 0.9267 | likely_pathogenic | 0.9389 | pathogenic | -0.05 | Destabilizing | 0.999 | D | 0.727 | prob.delet. | None | None | None | None | N |
E/Y | 0.743 | likely_pathogenic | 0.7843 | pathogenic | -0.021 | Destabilizing | 0.996 | D | 0.713 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.