Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18317 | 55174;55175;55176 | chr2:178602453;178602452;178602451 | chr2:179467180;179467179;179467178 |
N2AB | 16676 | 50251;50252;50253 | chr2:178602453;178602452;178602451 | chr2:179467180;179467179;179467178 |
N2A | 15749 | 47470;47471;47472 | chr2:178602453;178602452;178602451 | chr2:179467180;179467179;179467178 |
N2B | 9252 | 27979;27980;27981 | chr2:178602453;178602452;178602451 | chr2:179467180;179467179;179467178 |
Novex-1 | 9377 | 28354;28355;28356 | chr2:178602453;178602452;178602451 | chr2:179467180;179467179;179467178 |
Novex-2 | 9444 | 28555;28556;28557 | chr2:178602453;178602452;178602451 | chr2:179467180;179467179;179467178 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1487036474 | 0.005 | 0.099 | N | 0.317 | 0.053 | 0.202949470691 | gnomAD-2.1.1 | 4.04E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.91E-06 | 0 |
T/A | rs1487036474 | 0.005 | 0.099 | N | 0.317 | 0.053 | 0.202949470691 | gnomAD-4.0.0 | 1.59407E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86261E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0665 | likely_benign | 0.0648 | benign | -0.186 | Destabilizing | 0.099 | N | 0.317 | neutral | N | 0.434748271 | None | None | N |
T/C | 0.327 | likely_benign | 0.323 | benign | -0.242 | Destabilizing | 0.972 | D | 0.32 | neutral | None | None | None | None | N |
T/D | 0.2449 | likely_benign | 0.2339 | benign | 0.02 | Stabilizing | 0.617 | D | 0.32 | neutral | None | None | None | None | N |
T/E | 0.1906 | likely_benign | 0.1739 | benign | -0.072 | Destabilizing | 0.617 | D | 0.343 | neutral | None | None | None | None | N |
T/F | 0.2136 | likely_benign | 0.2324 | benign | -0.826 | Destabilizing | 0.85 | D | 0.348 | neutral | None | None | None | None | N |
T/G | 0.1471 | likely_benign | 0.1362 | benign | -0.257 | Destabilizing | 0.25 | N | 0.303 | neutral | None | None | None | None | N |
T/H | 0.2289 | likely_benign | 0.2402 | benign | -0.419 | Destabilizing | 0.92 | D | 0.329 | neutral | None | None | None | None | N |
T/I | 0.1361 | likely_benign | 0.1451 | benign | -0.121 | Destabilizing | 0.379 | N | 0.324 | neutral | N | 0.443791829 | None | None | N |
T/K | 0.1431 | likely_benign | 0.1438 | benign | -0.25 | Destabilizing | 0.447 | N | 0.337 | neutral | None | None | None | None | N |
T/L | 0.0869 | likely_benign | 0.094 | benign | -0.121 | Destabilizing | 0.002 | N | 0.148 | neutral | None | None | None | None | N |
T/M | 0.0831 | likely_benign | 0.0903 | benign | -0.099 | Destabilizing | 0.85 | D | 0.315 | neutral | None | None | None | None | N |
T/N | 0.1012 | likely_benign | 0.1036 | benign | 0.018 | Stabilizing | 0.379 | N | 0.269 | neutral | N | 0.387839759 | None | None | N |
T/P | 0.0899 | likely_benign | 0.0874 | benign | -0.118 | Destabilizing | 0.712 | D | 0.353 | neutral | N | 0.428206301 | None | None | N |
T/Q | 0.1806 | likely_benign | 0.177 | benign | -0.211 | Destabilizing | 0.85 | D | 0.339 | neutral | None | None | None | None | N |
T/R | 0.1397 | likely_benign | 0.1469 | benign | 0.066 | Stabilizing | 0.617 | D | 0.343 | neutral | None | None | None | None | N |
T/S | 0.0864 | likely_benign | 0.0823 | benign | -0.155 | Destabilizing | 0.002 | N | 0.101 | neutral | N | 0.405406799 | None | None | N |
T/V | 0.1077 | likely_benign | 0.1102 | benign | -0.118 | Destabilizing | 0.25 | N | 0.314 | neutral | None | None | None | None | N |
T/W | 0.4707 | ambiguous | 0.4966 | ambiguous | -0.902 | Destabilizing | 0.992 | D | 0.339 | neutral | None | None | None | None | N |
T/Y | 0.2496 | likely_benign | 0.2674 | benign | -0.585 | Destabilizing | 0.92 | D | 0.337 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.