Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18322 | 55189;55190;55191 | chr2:178602438;178602437;178602436 | chr2:179467165;179467164;179467163 |
N2AB | 16681 | 50266;50267;50268 | chr2:178602438;178602437;178602436 | chr2:179467165;179467164;179467163 |
N2A | 15754 | 47485;47486;47487 | chr2:178602438;178602437;178602436 | chr2:179467165;179467164;179467163 |
N2B | 9257 | 27994;27995;27996 | chr2:178602438;178602437;178602436 | chr2:179467165;179467164;179467163 |
Novex-1 | 9382 | 28369;28370;28371 | chr2:178602438;178602437;178602436 | chr2:179467165;179467164;179467163 |
Novex-2 | 9449 | 28570;28571;28572 | chr2:178602438;178602437;178602436 | chr2:179467165;179467164;179467163 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/I | None | None | 0.987 | N | 0.443 | 0.173 | 0.348764635752 | gnomAD-4.0.0 | 4.80129E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.25001E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.4205 | ambiguous | 0.2781 | benign | -1.301 | Destabilizing | 0.543 | D | 0.265 | neutral | N | 0.484379297 | None | None | N |
V/C | 0.7459 | likely_pathogenic | 0.6745 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.789 | deleterious | None | None | None | None | N |
V/D | 0.9069 | likely_pathogenic | 0.8209 | pathogenic | -1.181 | Destabilizing | 0.999 | D | 0.806 | deleterious | None | None | None | None | N |
V/E | 0.8054 | likely_pathogenic | 0.7137 | pathogenic | -1.204 | Destabilizing | 0.998 | D | 0.763 | deleterious | N | 0.4697119 | None | None | N |
V/F | 0.4006 | ambiguous | 0.3286 | benign | -1.086 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
V/G | 0.5281 | ambiguous | 0.3696 | ambiguous | -1.589 | Destabilizing | 0.997 | D | 0.707 | prob.neutral | N | 0.479132876 | None | None | N |
V/H | 0.9216 | likely_pathogenic | 0.8777 | pathogenic | -1.167 | Destabilizing | 1.0 | D | 0.793 | deleterious | None | None | None | None | N |
V/I | 0.0886 | likely_benign | 0.0847 | benign | -0.627 | Destabilizing | 0.987 | D | 0.443 | neutral | N | 0.481626993 | None | None | N |
V/K | 0.8462 | likely_pathogenic | 0.7924 | pathogenic | -1.22 | Destabilizing | 0.999 | D | 0.763 | deleterious | None | None | None | None | N |
V/L | 0.4073 | ambiguous | 0.3403 | ambiguous | -0.627 | Destabilizing | 0.973 | D | 0.441 | neutral | N | 0.487206171 | None | None | N |
V/M | 0.3426 | ambiguous | 0.2817 | benign | -0.464 | Destabilizing | 1.0 | D | 0.663 | neutral | None | None | None | None | N |
V/N | 0.8008 | likely_pathogenic | 0.688 | pathogenic | -0.983 | Destabilizing | 1.0 | D | 0.814 | deleterious | None | None | None | None | N |
V/P | 0.9104 | likely_pathogenic | 0.8243 | pathogenic | -0.817 | Destabilizing | 0.999 | D | 0.785 | deleterious | None | None | None | None | N |
V/Q | 0.8104 | likely_pathogenic | 0.7293 | pathogenic | -1.157 | Destabilizing | 1.0 | D | 0.801 | deleterious | None | None | None | None | N |
V/R | 0.8061 | likely_pathogenic | 0.7512 | pathogenic | -0.677 | Destabilizing | 0.999 | D | 0.813 | deleterious | None | None | None | None | N |
V/S | 0.6628 | likely_pathogenic | 0.5043 | ambiguous | -1.43 | Destabilizing | 0.995 | D | 0.699 | prob.neutral | None | None | None | None | N |
V/T | 0.5467 | ambiguous | 0.4289 | ambiguous | -1.344 | Destabilizing | 0.992 | D | 0.449 | neutral | None | None | None | None | N |
V/W | 0.9415 | likely_pathogenic | 0.9083 | pathogenic | -1.277 | Destabilizing | 1.0 | D | 0.779 | deleterious | None | None | None | None | N |
V/Y | 0.822 | likely_pathogenic | 0.7383 | pathogenic | -0.986 | Destabilizing | 1.0 | D | 0.807 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.