Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18323 | 55192;55193;55194 | chr2:178602435;178602434;178602433 | chr2:179467162;179467161;179467160 |
N2AB | 16682 | 50269;50270;50271 | chr2:178602435;178602434;178602433 | chr2:179467162;179467161;179467160 |
N2A | 15755 | 47488;47489;47490 | chr2:178602435;178602434;178602433 | chr2:179467162;179467161;179467160 |
N2B | 9258 | 27997;27998;27999 | chr2:178602435;178602434;178602433 | chr2:179467162;179467161;179467160 |
Novex-1 | 9383 | 28372;28373;28374 | chr2:178602435;178602434;178602433 | chr2:179467162;179467161;179467160 |
Novex-2 | 9450 | 28573;28574;28575 | chr2:178602435;178602434;178602433 | chr2:179467162;179467161;179467160 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | rs765413044 | -0.576 | 0.998 | N | 0.593 | 0.252 | 0.144782658237 | gnomAD-2.1.1 | 4.03E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | None | 0 | 8.9E-06 | 0 |
N/K | rs765413044 | -0.576 | 0.998 | N | 0.593 | 0.252 | 0.144782658237 | gnomAD-4.0.0 | 4.78123E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 8.58698E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.5482 | ambiguous | 0.4968 | ambiguous | -0.961 | Destabilizing | 0.997 | D | 0.59 | neutral | None | None | None | None | N |
N/C | 0.4394 | ambiguous | 0.421 | ambiguous | -0.144 | Destabilizing | 1.0 | D | 0.777 | deleterious | None | None | None | None | N |
N/D | 0.5231 | ambiguous | 0.5211 | ambiguous | -0.671 | Destabilizing | 0.998 | D | 0.513 | neutral | N | 0.507880593 | None | None | N |
N/E | 0.8639 | likely_pathogenic | 0.8553 | pathogenic | -0.524 | Destabilizing | 0.998 | D | 0.565 | neutral | None | None | None | None | N |
N/F | 0.876 | likely_pathogenic | 0.8584 | pathogenic | -0.459 | Destabilizing | 1.0 | D | 0.796 | deleterious | None | None | None | None | N |
N/G | 0.4951 | ambiguous | 0.4635 | ambiguous | -1.341 | Destabilizing | 0.998 | D | 0.473 | neutral | None | None | None | None | N |
N/H | 0.3717 | ambiguous | 0.3497 | ambiguous | -0.93 | Destabilizing | 1.0 | D | 0.719 | prob.delet. | N | 0.500935978 | None | None | N |
N/I | 0.5719 | likely_pathogenic | 0.5397 | ambiguous | 0.03 | Stabilizing | 0.999 | D | 0.788 | deleterious | D | 0.523138047 | None | None | N |
N/K | 0.9199 | likely_pathogenic | 0.8968 | pathogenic | -0.344 | Destabilizing | 0.998 | D | 0.593 | neutral | N | 0.465687254 | None | None | N |
N/L | 0.5253 | ambiguous | 0.5121 | ambiguous | 0.03 | Stabilizing | 0.999 | D | 0.717 | prob.delet. | None | None | None | None | N |
N/M | 0.5954 | likely_pathogenic | 0.5692 | pathogenic | 0.316 | Stabilizing | 1.0 | D | 0.773 | deleterious | None | None | None | None | N |
N/P | 0.8349 | likely_pathogenic | 0.8251 | pathogenic | -0.271 | Destabilizing | 1.0 | D | 0.759 | deleterious | None | None | None | None | N |
N/Q | 0.8117 | likely_pathogenic | 0.7738 | pathogenic | -0.835 | Destabilizing | 1.0 | D | 0.721 | prob.delet. | None | None | None | None | N |
N/R | 0.8941 | likely_pathogenic | 0.863 | pathogenic | -0.47 | Destabilizing | 1.0 | D | 0.697 | prob.neutral | None | None | None | None | N |
N/S | 0.1221 | likely_benign | 0.1149 | benign | -1.048 | Destabilizing | 0.992 | D | 0.475 | neutral | N | 0.479749842 | None | None | N |
N/T | 0.1962 | likely_benign | 0.1977 | benign | -0.705 | Destabilizing | 0.767 | D | 0.379 | neutral | N | 0.473573231 | None | None | N |
N/V | 0.5159 | ambiguous | 0.5021 | ambiguous | -0.271 | Destabilizing | 0.999 | D | 0.73 | prob.delet. | None | None | None | None | N |
N/W | 0.9379 | likely_pathogenic | 0.9252 | pathogenic | -0.198 | Destabilizing | 1.0 | D | 0.754 | deleterious | None | None | None | None | N |
N/Y | 0.5789 | likely_pathogenic | 0.5302 | ambiguous | 0.014 | Stabilizing | 1.0 | D | 0.773 | deleterious | N | 0.460782866 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.