Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18324 | 55195;55196;55197 | chr2:178602432;178602431;178602430 | chr2:179467159;179467158;179467157 |
N2AB | 16683 | 50272;50273;50274 | chr2:178602432;178602431;178602430 | chr2:179467159;179467158;179467157 |
N2A | 15756 | 47491;47492;47493 | chr2:178602432;178602431;178602430 | chr2:179467159;179467158;179467157 |
N2B | 9259 | 28000;28001;28002 | chr2:178602432;178602431;178602430 | chr2:179467159;179467158;179467157 |
Novex-1 | 9384 | 28375;28376;28377 | chr2:178602432;178602431;178602430 | chr2:179467159;179467158;179467157 |
Novex-2 | 9451 | 28576;28577;28578 | chr2:178602432;178602431;178602430 | chr2:179467159;179467158;179467157 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/Q | None | None | 0.98 | N | 0.431 | 0.208 | 0.297031009988 | gnomAD-4.0.0 | 1.59372E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43361E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1255 | likely_benign | 0.1203 | benign | -0.164 | Destabilizing | 0.98 | D | 0.455 | neutral | N | 0.464164314 | None | None | N |
E/C | 0.7394 | likely_pathogenic | 0.7422 | pathogenic | -0.013 | Destabilizing | 1.0 | D | 0.695 | prob.neutral | None | None | None | None | N |
E/D | 0.0809 | likely_benign | 0.0802 | benign | -0.221 | Destabilizing | 0.011 | N | 0.133 | neutral | N | 0.416893229 | None | None | N |
E/F | 0.6161 | likely_pathogenic | 0.5978 | pathogenic | -0.167 | Destabilizing | 0.999 | D | 0.621 | neutral | None | None | None | None | N |
E/G | 0.1109 | likely_benign | 0.1061 | benign | -0.324 | Destabilizing | 0.961 | D | 0.464 | neutral | N | 0.460953438 | None | None | N |
E/H | 0.3397 | likely_benign | 0.3237 | benign | 0.209 | Stabilizing | 0.999 | D | 0.417 | neutral | None | None | None | None | N |
E/I | 0.2693 | likely_benign | 0.248 | benign | 0.208 | Stabilizing | 0.999 | D | 0.601 | neutral | None | None | None | None | N |
E/K | 0.1387 | likely_benign | 0.12 | benign | 0.391 | Stabilizing | 0.961 | D | 0.493 | neutral | N | 0.448485573 | None | None | N |
E/L | 0.2829 | likely_benign | 0.267 | benign | 0.208 | Stabilizing | 0.996 | D | 0.594 | neutral | None | None | None | None | N |
E/M | 0.3743 | ambiguous | 0.348 | ambiguous | 0.159 | Stabilizing | 1.0 | D | 0.579 | neutral | None | None | None | None | N |
E/N | 0.1663 | likely_benign | 0.1662 | benign | 0.198 | Stabilizing | 0.97 | D | 0.439 | neutral | None | None | None | None | N |
E/P | 0.2697 | likely_benign | 0.2568 | benign | 0.104 | Stabilizing | 0.999 | D | 0.418 | neutral | None | None | None | None | N |
E/Q | 0.1237 | likely_benign | 0.1134 | benign | 0.216 | Stabilizing | 0.98 | D | 0.431 | neutral | N | 0.459067926 | None | None | N |
E/R | 0.2418 | likely_benign | 0.2134 | benign | 0.593 | Stabilizing | 0.996 | D | 0.414 | neutral | None | None | None | None | N |
E/S | 0.1421 | likely_benign | 0.1415 | benign | 0.025 | Stabilizing | 0.97 | D | 0.467 | neutral | None | None | None | None | N |
E/T | 0.1694 | likely_benign | 0.1564 | benign | 0.154 | Stabilizing | 0.985 | D | 0.411 | neutral | None | None | None | None | N |
E/V | 0.1705 | likely_benign | 0.1586 | benign | 0.104 | Stabilizing | 0.998 | D | 0.483 | neutral | N | 0.467257761 | None | None | N |
E/W | 0.8356 | likely_pathogenic | 0.8237 | pathogenic | -0.086 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
E/Y | 0.4749 | ambiguous | 0.4572 | ambiguous | 0.064 | Stabilizing | 0.999 | D | 0.569 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.