Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18329 | 55210;55211;55212 | chr2:178602417;178602416;178602415 | chr2:179467144;179467143;179467142 |
N2AB | 16688 | 50287;50288;50289 | chr2:178602417;178602416;178602415 | chr2:179467144;179467143;179467142 |
N2A | 15761 | 47506;47507;47508 | chr2:178602417;178602416;178602415 | chr2:179467144;179467143;179467142 |
N2B | 9264 | 28015;28016;28017 | chr2:178602417;178602416;178602415 | chr2:179467144;179467143;179467142 |
Novex-1 | 9389 | 28390;28391;28392 | chr2:178602417;178602416;178602415 | chr2:179467144;179467143;179467142 |
Novex-2 | 9456 | 28591;28592;28593 | chr2:178602417;178602416;178602415 | chr2:179467144;179467143;179467142 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | 0.001 | N | 0.333 | 0.037 | 0.17948927462 | gnomAD-4.0.0 | 1.3692E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.79966E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.4635 | ambiguous | 0.4297 | ambiguous | -2.022 | Highly Destabilizing | 0.008 | N | 0.351 | neutral | None | None | None | None | N |
I/C | 0.4975 | ambiguous | 0.4471 | ambiguous | -1.182 | Destabilizing | 0.497 | N | 0.455 | neutral | None | None | None | None | N |
I/D | 0.7608 | likely_pathogenic | 0.7051 | pathogenic | -1.621 | Destabilizing | 0.085 | N | 0.445 | neutral | None | None | None | None | N |
I/E | 0.6188 | likely_pathogenic | 0.5779 | pathogenic | -1.469 | Destabilizing | 0.018 | N | 0.401 | neutral | None | None | None | None | N |
I/F | 0.1121 | likely_benign | 0.0897 | benign | -1.157 | Destabilizing | None | N | 0.144 | neutral | None | None | None | None | N |
I/G | 0.7409 | likely_pathogenic | 0.6989 | pathogenic | -2.501 | Highly Destabilizing | 0.037 | N | 0.41 | neutral | None | None | None | None | N |
I/H | 0.3515 | ambiguous | 0.2819 | benign | -1.805 | Destabilizing | None | N | 0.447 | neutral | None | None | None | None | N |
I/K | 0.4625 | ambiguous | 0.4124 | ambiguous | -1.344 | Destabilizing | 0.014 | N | 0.415 | neutral | N | 0.504405066 | None | None | N |
I/L | 0.0779 | likely_benign | 0.077 | benign | -0.692 | Destabilizing | None | N | 0.143 | neutral | N | 0.479565336 | None | None | N |
I/M | 0.1014 | likely_benign | 0.0955 | benign | -0.559 | Destabilizing | 0.017 | N | 0.471 | neutral | N | 0.510312318 | None | None | N |
I/N | 0.2939 | likely_benign | 0.2578 | benign | -1.44 | Destabilizing | 0.044 | N | 0.447 | neutral | None | None | None | None | N |
I/P | 0.7717 | likely_pathogenic | 0.7638 | pathogenic | -1.11 | Destabilizing | 0.22 | N | 0.511 | neutral | None | None | None | None | N |
I/Q | 0.371 | ambiguous | 0.321 | benign | -1.404 | Destabilizing | 0.085 | N | 0.515 | neutral | None | None | None | None | N |
I/R | 0.3679 | ambiguous | 0.324 | benign | -0.996 | Destabilizing | 0.033 | N | 0.466 | neutral | N | 0.473138033 | None | None | N |
I/S | 0.3946 | ambiguous | 0.3592 | ambiguous | -2.185 | Highly Destabilizing | 0.037 | N | 0.377 | neutral | None | None | None | None | N |
I/T | 0.4041 | ambiguous | 0.3984 | ambiguous | -1.896 | Destabilizing | 0.014 | N | 0.375 | neutral | N | 0.439796227 | None | None | N |
I/V | 0.1037 | likely_benign | 0.0969 | benign | -1.11 | Destabilizing | 0.001 | N | 0.333 | neutral | N | 0.405163578 | None | None | N |
I/W | 0.5673 | likely_pathogenic | 0.5029 | ambiguous | -1.425 | Destabilizing | 0.497 | N | 0.487 | neutral | None | None | None | None | N |
I/Y | 0.3566 | ambiguous | 0.27 | benign | -1.124 | Destabilizing | 0.009 | N | 0.37 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.