Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18331 | 55216;55217;55218 | chr2:178602411;178602410;178602409 | chr2:179467138;179467137;179467136 |
N2AB | 16690 | 50293;50294;50295 | chr2:178602411;178602410;178602409 | chr2:179467138;179467137;179467136 |
N2A | 15763 | 47512;47513;47514 | chr2:178602411;178602410;178602409 | chr2:179467138;179467137;179467136 |
N2B | 9266 | 28021;28022;28023 | chr2:178602411;178602410;178602409 | chr2:179467138;179467137;179467136 |
Novex-1 | 9391 | 28396;28397;28398 | chr2:178602411;178602410;178602409 | chr2:179467138;179467137;179467136 |
Novex-2 | 9458 | 28597;28598;28599 | chr2:178602411;178602410;178602409 | chr2:179467138;179467137;179467136 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/I | rs2053691447 | None | 0.497 | N | 0.675 | 0.254 | 0.499218193508 | gnomAD-4.0.0 | 1.59343E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86207E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0711 | likely_benign | 0.0661 | benign | -0.808 | Destabilizing | None | N | 0.19 | neutral | N | 0.473192016 | None | None | N |
T/C | 0.396 | ambiguous | 0.3837 | ambiguous | -0.54 | Destabilizing | 0.909 | D | 0.707 | prob.neutral | None | None | None | None | N |
T/D | 0.2509 | likely_benign | 0.2372 | benign | -0.086 | Destabilizing | 0.567 | D | 0.645 | neutral | None | None | None | None | N |
T/E | 0.2341 | likely_benign | 0.2272 | benign | -0.031 | Destabilizing | 0.157 | N | 0.618 | neutral | None | None | None | None | N |
T/F | 0.2423 | likely_benign | 0.2402 | benign | -0.927 | Destabilizing | 0.726 | D | 0.765 | deleterious | None | None | None | None | N |
T/G | 0.161 | likely_benign | 0.1346 | benign | -1.076 | Destabilizing | 0.157 | N | 0.606 | neutral | None | None | None | None | N |
T/H | 0.2237 | likely_benign | 0.2144 | benign | -1.093 | Destabilizing | 0.909 | D | 0.755 | deleterious | None | None | None | None | N |
T/I | 0.2034 | likely_benign | 0.1967 | benign | -0.172 | Destabilizing | 0.497 | N | 0.675 | prob.neutral | N | 0.492297852 | None | None | N |
T/K | 0.1836 | likely_benign | 0.1745 | benign | -0.46 | Destabilizing | 0.157 | N | 0.62 | neutral | None | None | None | None | N |
T/L | 0.1231 | likely_benign | 0.1234 | benign | -0.172 | Destabilizing | 0.157 | N | 0.575 | neutral | None | None | None | None | N |
T/M | 0.122 | likely_benign | 0.122 | benign | -0.259 | Destabilizing | 0.909 | D | 0.711 | prob.delet. | None | None | None | None | N |
T/N | 0.1001 | likely_benign | 0.0968 | benign | -0.615 | Destabilizing | 0.331 | N | 0.532 | neutral | N | 0.447370852 | None | None | N |
T/P | 0.2112 | likely_benign | 0.2222 | benign | -0.353 | Destabilizing | 0.497 | N | 0.703 | prob.neutral | N | 0.471764086 | None | None | N |
T/Q | 0.2005 | likely_benign | 0.1923 | benign | -0.603 | Destabilizing | 0.567 | D | 0.728 | prob.delet. | None | None | None | None | N |
T/R | 0.1605 | likely_benign | 0.1582 | benign | -0.295 | Destabilizing | 0.567 | D | 0.716 | prob.delet. | None | None | None | None | N |
T/S | 0.0819 | likely_benign | 0.0753 | benign | -0.911 | Destabilizing | 0.001 | N | 0.191 | neutral | N | 0.416029225 | None | None | N |
T/V | 0.1424 | likely_benign | 0.137 | benign | -0.353 | Destabilizing | 0.157 | N | 0.455 | neutral | None | None | None | None | N |
T/W | 0.6175 | likely_pathogenic | 0.5935 | pathogenic | -0.968 | Destabilizing | 0.968 | D | 0.741 | deleterious | None | None | None | None | N |
T/Y | 0.2749 | likely_benign | 0.2688 | benign | -0.662 | Destabilizing | 0.726 | D | 0.765 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.