Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18334 | 55225;55226;55227 | chr2:178602402;178602401;178602400 | chr2:179467129;179467128;179467127 |
N2AB | 16693 | 50302;50303;50304 | chr2:178602402;178602401;178602400 | chr2:179467129;179467128;179467127 |
N2A | 15766 | 47521;47522;47523 | chr2:178602402;178602401;178602400 | chr2:179467129;179467128;179467127 |
N2B | 9269 | 28030;28031;28032 | chr2:178602402;178602401;178602400 | chr2:179467129;179467128;179467127 |
Novex-1 | 9394 | 28405;28406;28407 | chr2:178602402;178602401;178602400 | chr2:179467129;179467128;179467127 |
Novex-2 | 9461 | 28606;28607;28608 | chr2:178602402;178602401;178602400 | chr2:179467129;179467128;179467127 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/R | rs1375579390 | None | 0.602 | N | 0.645 | 0.424 | 0.706878895572 | gnomAD-4.0.0 | 8.21536E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 7.19885E-06 | 0 | 6.6313E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.3816 | ambiguous | 0.3393 | benign | -1.46 | Destabilizing | 0.104 | N | 0.369 | neutral | None | None | None | None | N |
C/D | 0.7974 | likely_pathogenic | 0.775 | pathogenic | 0.251 | Stabilizing | 0.667 | D | 0.656 | neutral | None | None | None | None | N |
C/E | 0.8525 | likely_pathogenic | 0.8289 | pathogenic | 0.377 | Stabilizing | 0.667 | D | 0.655 | neutral | None | None | None | None | N |
C/F | 0.1348 | likely_benign | 0.099 | benign | -0.912 | Destabilizing | None | N | 0.492 | neutral | N | 0.425934 | None | None | N |
C/G | 0.2423 | likely_benign | 0.2369 | benign | -1.763 | Destabilizing | 0.301 | N | 0.621 | neutral | N | 0.513131697 | None | None | N |
C/H | 0.5194 | ambiguous | 0.4732 | ambiguous | -1.602 | Destabilizing | 0.497 | N | 0.644 | neutral | None | None | None | None | N |
C/I | 0.4488 | ambiguous | 0.3299 | benign | -0.683 | Destabilizing | 0.22 | N | 0.547 | neutral | None | None | None | None | N |
C/K | 0.8375 | likely_pathogenic | 0.8295 | pathogenic | -0.404 | Destabilizing | 0.497 | N | 0.654 | neutral | None | None | None | None | N |
C/L | 0.402 | ambiguous | 0.293 | benign | -0.683 | Destabilizing | 0.055 | N | 0.506 | neutral | None | None | None | None | N |
C/M | 0.4946 | ambiguous | 0.4184 | ambiguous | 0.085 | Stabilizing | 0.859 | D | 0.591 | neutral | None | None | None | None | N |
C/N | 0.5989 | likely_pathogenic | 0.5669 | pathogenic | -0.612 | Destabilizing | 0.667 | D | 0.646 | neutral | None | None | None | None | N |
C/P | 0.9889 | likely_pathogenic | 0.9845 | pathogenic | -0.916 | Destabilizing | 0.859 | D | 0.639 | neutral | None | None | None | None | N |
C/Q | 0.7171 | likely_pathogenic | 0.6894 | pathogenic | -0.39 | Destabilizing | 0.667 | D | 0.637 | neutral | None | None | None | None | N |
C/R | 0.5985 | likely_pathogenic | 0.5666 | pathogenic | -0.412 | Destabilizing | 0.602 | D | 0.645 | neutral | N | 0.487902877 | None | None | N |
C/S | 0.3802 | ambiguous | 0.3519 | ambiguous | -1.162 | Destabilizing | 0.175 | N | 0.565 | neutral | N | 0.507032444 | None | None | N |
C/T | 0.4553 | ambiguous | 0.4105 | ambiguous | -0.836 | Destabilizing | 0.364 | N | 0.561 | neutral | None | None | None | None | N |
C/V | 0.3743 | ambiguous | 0.2859 | benign | -0.916 | Destabilizing | 0.104 | N | 0.501 | neutral | None | None | None | None | N |
C/W | 0.4412 | ambiguous | 0.3545 | ambiguous | -0.919 | Destabilizing | 0.602 | D | 0.599 | neutral | N | 0.520943104 | None | None | N |
C/Y | 0.1693 | likely_benign | 0.1265 | benign | -0.856 | Destabilizing | None | N | 0.481 | neutral | N | 0.423333625 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.