Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18336 | 55231;55232;55233 | chr2:178602396;178602395;178602394 | chr2:179467123;179467122;179467121 |
N2AB | 16695 | 50308;50309;50310 | chr2:178602396;178602395;178602394 | chr2:179467123;179467122;179467121 |
N2A | 15768 | 47527;47528;47529 | chr2:178602396;178602395;178602394 | chr2:179467123;179467122;179467121 |
N2B | 9271 | 28036;28037;28038 | chr2:178602396;178602395;178602394 | chr2:179467123;179467122;179467121 |
Novex-1 | 9396 | 28411;28412;28413 | chr2:178602396;178602395;178602394 | chr2:179467123;179467122;179467121 |
Novex-2 | 9463 | 28612;28613;28614 | chr2:178602396;178602395;178602394 | chr2:179467123;179467122;179467121 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/E | None | None | 0.997 | D | 0.879 | 0.632 | 0.813960563265 | gnomAD-4.0.0 | 1.59327E-06 | None | None | None | None | N | None | 5.66958E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
V/A | 0.639 | likely_pathogenic | 0.5063 | ambiguous | -1.883 | Destabilizing | 0.939 | D | 0.68 | prob.neutral | N | 0.489190913 | None | None | N |
V/C | 0.8871 | likely_pathogenic | 0.8585 | pathogenic | -1.523 | Destabilizing | 0.999 | D | 0.805 | deleterious | None | None | None | None | N |
V/D | 0.9843 | likely_pathogenic | 0.9789 | pathogenic | -2.067 | Highly Destabilizing | 0.998 | D | 0.878 | deleterious | None | None | None | None | N |
V/E | 0.9481 | likely_pathogenic | 0.9359 | pathogenic | -1.848 | Destabilizing | 0.997 | D | 0.879 | deleterious | D | 0.527311981 | None | None | N |
V/F | 0.4716 | ambiguous | 0.3809 | ambiguous | -1.127 | Destabilizing | 0.986 | D | 0.833 | deleterious | None | None | None | None | N |
V/G | 0.8786 | likely_pathogenic | 0.8149 | pathogenic | -2.415 | Highly Destabilizing | 0.991 | D | 0.885 | deleterious | D | 0.522539041 | None | None | N |
V/H | 0.9723 | likely_pathogenic | 0.9614 | pathogenic | -2.046 | Highly Destabilizing | 0.999 | D | 0.869 | deleterious | None | None | None | None | N |
V/I | 0.0851 | likely_benign | 0.0818 | benign | -0.41 | Destabilizing | 0.06 | N | 0.228 | neutral | None | None | None | None | N |
V/K | 0.9599 | likely_pathogenic | 0.9507 | pathogenic | -1.587 | Destabilizing | 0.993 | D | 0.876 | deleterious | None | None | None | None | N |
V/L | 0.4266 | ambiguous | 0.3459 | ambiguous | -0.41 | Destabilizing | 0.76 | D | 0.425 | neutral | N | 0.518921519 | None | None | N |
V/M | 0.4455 | ambiguous | 0.3623 | ambiguous | -0.508 | Destabilizing | 0.76 | D | 0.535 | neutral | N | 0.510675756 | None | None | N |
V/N | 0.9511 | likely_pathogenic | 0.9383 | pathogenic | -1.883 | Destabilizing | 0.998 | D | 0.886 | deleterious | None | None | None | None | N |
V/P | 0.9682 | likely_pathogenic | 0.9609 | pathogenic | -0.873 | Destabilizing | 0.998 | D | 0.866 | deleterious | None | None | None | None | N |
V/Q | 0.9332 | likely_pathogenic | 0.914 | pathogenic | -1.696 | Destabilizing | 0.993 | D | 0.875 | deleterious | None | None | None | None | N |
V/R | 0.9383 | likely_pathogenic | 0.9261 | pathogenic | -1.507 | Destabilizing | 0.993 | D | 0.882 | deleterious | None | None | None | None | N |
V/S | 0.8534 | likely_pathogenic | 0.7846 | pathogenic | -2.545 | Highly Destabilizing | 0.993 | D | 0.852 | deleterious | None | None | None | None | N |
V/T | 0.7891 | likely_pathogenic | 0.6992 | pathogenic | -2.159 | Highly Destabilizing | 0.953 | D | 0.693 | prob.neutral | None | None | None | None | N |
V/W | 0.9759 | likely_pathogenic | 0.9688 | pathogenic | -1.515 | Destabilizing | 0.999 | D | 0.847 | deleterious | None | None | None | None | N |
V/Y | 0.8987 | likely_pathogenic | 0.8635 | pathogenic | -1.131 | Destabilizing | 0.998 | D | 0.815 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.