Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18338 | 55237;55238;55239 | chr2:178602390;178602389;178602388 | chr2:179467117;179467116;179467115 |
N2AB | 16697 | 50314;50315;50316 | chr2:178602390;178602389;178602388 | chr2:179467117;179467116;179467115 |
N2A | 15770 | 47533;47534;47535 | chr2:178602390;178602389;178602388 | chr2:179467117;179467116;179467115 |
N2B | 9273 | 28042;28043;28044 | chr2:178602390;178602389;178602388 | chr2:179467117;179467116;179467115 |
Novex-1 | 9398 | 28417;28418;28419 | chr2:178602390;178602389;178602388 | chr2:179467117;179467116;179467115 |
Novex-2 | 9465 | 28618;28619;28620 | chr2:178602390;178602389;178602388 | chr2:179467117;179467116;179467115 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/K | None | None | 0.801 | N | 0.346 | 0.111 | 0.162503812791 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
N/A | 0.1482 | likely_benign | 0.1428 | benign | -0.067 | Destabilizing | 0.525 | D | 0.347 | neutral | None | None | None | None | N |
N/C | 0.255 | likely_benign | 0.2606 | benign | 0.09 | Stabilizing | 0.998 | D | 0.431 | neutral | None | None | None | None | N |
N/D | 0.0923 | likely_benign | 0.0891 | benign | 0.124 | Stabilizing | 0.005 | N | 0.157 | neutral | N | 0.43600656 | None | None | N |
N/E | 0.2604 | likely_benign | 0.2556 | benign | 0.065 | Stabilizing | 0.525 | D | 0.339 | neutral | None | None | None | None | N |
N/F | 0.421 | ambiguous | 0.4388 | ambiguous | -0.7 | Destabilizing | 0.991 | D | 0.447 | neutral | None | None | None | None | N |
N/G | 0.1629 | likely_benign | 0.1546 | benign | -0.154 | Destabilizing | 0.688 | D | 0.371 | neutral | None | None | None | None | N |
N/H | 0.1019 | likely_benign | 0.1052 | benign | -0.152 | Destabilizing | 0.989 | D | 0.412 | neutral | N | 0.511315182 | None | None | N |
N/I | 0.251 | likely_benign | 0.2628 | benign | 0.059 | Stabilizing | 0.966 | D | 0.457 | neutral | N | 0.486930782 | None | None | N |
N/K | 0.2301 | likely_benign | 0.2239 | benign | 0.133 | Stabilizing | 0.801 | D | 0.346 | neutral | N | 0.476413175 | None | None | N |
N/L | 0.219 | likely_benign | 0.225 | benign | 0.059 | Stabilizing | 0.915 | D | 0.456 | neutral | None | None | None | None | N |
N/M | 0.3038 | likely_benign | 0.3214 | benign | 0.059 | Stabilizing | 0.998 | D | 0.406 | neutral | None | None | None | None | N |
N/P | 0.623 | likely_pathogenic | 0.5592 | ambiguous | 0.039 | Stabilizing | 0.974 | D | 0.423 | neutral | None | None | None | None | N |
N/Q | 0.2385 | likely_benign | 0.2406 | benign | -0.276 | Destabilizing | 0.974 | D | 0.378 | neutral | None | None | None | None | N |
N/R | 0.2862 | likely_benign | 0.3014 | benign | 0.198 | Stabilizing | 0.974 | D | 0.377 | neutral | None | None | None | None | N |
N/S | 0.0734 | likely_benign | 0.0741 | benign | -0.064 | Destabilizing | 0.062 | N | 0.156 | neutral | N | 0.483243146 | None | None | N |
N/T | 0.1198 | likely_benign | 0.1215 | benign | -0.008 | Destabilizing | 0.669 | D | 0.348 | neutral | N | 0.46106462 | None | None | N |
N/V | 0.2174 | likely_benign | 0.2191 | benign | 0.039 | Stabilizing | 0.974 | D | 0.458 | neutral | None | None | None | None | N |
N/W | 0.7201 | likely_pathogenic | 0.7322 | pathogenic | -0.851 | Destabilizing | 0.998 | D | 0.585 | neutral | None | None | None | None | N |
N/Y | 0.1427 | likely_benign | 0.1564 | benign | -0.508 | Destabilizing | 0.989 | D | 0.418 | neutral | N | 0.498033598 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.