Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18364 | 55315;55316;55317 | chr2:178602312;178602311;178602310 | chr2:179467039;179467038;179467037 |
N2AB | 16723 | 50392;50393;50394 | chr2:178602312;178602311;178602310 | chr2:179467039;179467038;179467037 |
N2A | 15796 | 47611;47612;47613 | chr2:178602312;178602311;178602310 | chr2:179467039;179467038;179467037 |
N2B | 9299 | 28120;28121;28122 | chr2:178602312;178602311;178602310 | chr2:179467039;179467038;179467037 |
Novex-1 | 9424 | 28495;28496;28497 | chr2:178602312;178602311;178602310 | chr2:179467039;179467038;179467037 |
Novex-2 | 9491 | 28696;28697;28698 | chr2:178602312;178602311;178602310 | chr2:179467039;179467038;179467037 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | rs1467489292 | None | 0.997 | N | 0.677 | 0.211 | 0.335910606209 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | N | None | 2.41E-05 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
T/A | rs1467489292 | None | 0.997 | N | 0.677 | 0.211 | 0.335910606209 | gnomAD-4.0.0 | 6.57748E-06 | None | None | None | None | N | None | 2.41301E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.1497 | likely_benign | 0.1515 | benign | -1.133 | Destabilizing | 0.997 | D | 0.677 | prob.neutral | N | 0.508486387 | None | None | N |
T/C | 0.5169 | ambiguous | 0.5708 | pathogenic | -0.628 | Destabilizing | 1.0 | D | 0.802 | deleterious | None | None | None | None | N |
T/D | 0.6606 | likely_pathogenic | 0.6832 | pathogenic | -0.485 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
T/E | 0.6178 | likely_pathogenic | 0.6298 | pathogenic | -0.375 | Destabilizing | 0.999 | D | 0.855 | deleterious | None | None | None | None | N |
T/F | 0.6179 | likely_pathogenic | 0.6538 | pathogenic | -0.898 | Destabilizing | 0.999 | D | 0.861 | deleterious | None | None | None | None | N |
T/G | 0.3584 | ambiguous | 0.3879 | ambiguous | -1.497 | Destabilizing | 0.999 | D | 0.799 | deleterious | None | None | None | None | N |
T/H | 0.5656 | likely_pathogenic | 0.6041 | pathogenic | -1.575 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | N |
T/I | 0.4526 | ambiguous | 0.4647 | ambiguous | -0.212 | Destabilizing | 0.999 | D | 0.842 | deleterious | D | 0.527421651 | None | None | N |
T/K | 0.5014 | ambiguous | 0.5054 | ambiguous | -0.591 | Destabilizing | 0.999 | D | 0.857 | deleterious | None | None | None | None | N |
T/L | 0.2571 | likely_benign | 0.2777 | benign | -0.212 | Destabilizing | 0.998 | D | 0.792 | deleterious | None | None | None | None | N |
T/M | 0.2248 | likely_benign | 0.2389 | benign | -0.054 | Destabilizing | 1.0 | D | 0.797 | deleterious | None | None | None | None | N |
T/N | 0.3386 | likely_benign | 0.358 | ambiguous | -0.869 | Destabilizing | 0.999 | D | 0.789 | deleterious | N | 0.516331886 | None | None | N |
T/P | 0.2458 | likely_benign | 0.2899 | benign | -0.486 | Destabilizing | 0.999 | D | 0.826 | deleterious | N | 0.480590496 | None | None | N |
T/Q | 0.5134 | ambiguous | 0.5335 | ambiguous | -0.835 | Destabilizing | 0.999 | D | 0.807 | deleterious | None | None | None | None | N |
T/R | 0.4438 | ambiguous | 0.464 | ambiguous | -0.561 | Destabilizing | 0.999 | D | 0.825 | deleterious | None | None | None | None | N |
T/S | 0.1592 | likely_benign | 0.1687 | benign | -1.231 | Destabilizing | 0.997 | D | 0.691 | prob.delet. | N | 0.409551543 | None | None | N |
T/V | 0.2873 | likely_benign | 0.2922 | benign | -0.486 | Destabilizing | 0.998 | D | 0.732 | deleterious | None | None | None | None | N |
T/W | 0.8353 | likely_pathogenic | 0.8698 | pathogenic | -0.86 | Destabilizing | 1.0 | D | 0.836 | deleterious | None | None | None | None | N |
T/Y | 0.6775 | likely_pathogenic | 0.707 | pathogenic | -0.584 | Destabilizing | 1.0 | D | 0.874 | deleterious | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.