Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18387 | 55384;55385;55386 | chr2:178602112;178602111;178602110 | chr2:179466839;179466838;179466837 |
N2AB | 16746 | 50461;50462;50463 | chr2:178602112;178602111;178602110 | chr2:179466839;179466838;179466837 |
N2A | 15819 | 47680;47681;47682 | chr2:178602112;178602111;178602110 | chr2:179466839;179466838;179466837 |
N2B | 9322 | 28189;28190;28191 | chr2:178602112;178602111;178602110 | chr2:179466839;179466838;179466837 |
Novex-1 | 9447 | 28564;28565;28566 | chr2:178602112;178602111;178602110 | chr2:179466839;179466838;179466837 |
Novex-2 | 9514 | 28765;28766;28767 | chr2:178602112;178602111;178602110 | chr2:179466839;179466838;179466837 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/S | None | None | None | N | 0.331 | 0.15 | 0.266843984389 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
C/A | 0.2127 | likely_benign | 0.1957 | benign | -1.364 | Destabilizing | 0.002 | N | 0.391 | neutral | None | None | None | None | I |
C/D | 0.5004 | ambiguous | 0.4651 | ambiguous | 0.029 | Stabilizing | 0.022 | N | 0.535 | neutral | None | None | None | None | I |
C/E | 0.5568 | ambiguous | 0.5298 | ambiguous | 0.091 | Stabilizing | 0.022 | N | 0.535 | neutral | None | None | None | None | I |
C/F | 0.1011 | likely_benign | 0.0962 | benign | -0.783 | Destabilizing | None | N | 0.457 | neutral | N | 0.387674761 | None | None | I |
C/G | 0.1323 | likely_benign | 0.1272 | benign | -1.637 | Destabilizing | 0.007 | N | 0.461 | neutral | N | 0.342883834 | None | None | I |
C/H | 0.2952 | likely_benign | 0.2736 | benign | -1.574 | Destabilizing | 0.245 | N | 0.533 | neutral | None | None | None | None | I |
C/I | 0.2096 | likely_benign | 0.1934 | benign | -0.688 | Destabilizing | 0.004 | N | 0.412 | neutral | None | None | None | None | I |
C/K | 0.6026 | likely_pathogenic | 0.6024 | pathogenic | -0.739 | Destabilizing | 0.009 | N | 0.496 | neutral | None | None | None | None | I |
C/L | 0.2014 | likely_benign | 0.1865 | benign | -0.688 | Destabilizing | None | N | 0.323 | neutral | None | None | None | None | I |
C/M | 0.2835 | likely_benign | 0.256 | benign | 0.133 | Stabilizing | 0.138 | N | 0.549 | neutral | None | None | None | None | I |
C/N | 0.2253 | likely_benign | 0.1904 | benign | -0.566 | Destabilizing | 0.022 | N | 0.549 | neutral | None | None | None | None | I |
C/P | 0.8879 | likely_pathogenic | 0.8612 | pathogenic | -0.887 | Destabilizing | 0.044 | N | 0.573 | neutral | None | None | None | None | I |
C/Q | 0.366 | ambiguous | 0.3405 | ambiguous | -0.538 | Destabilizing | 0.044 | N | 0.573 | neutral | None | None | None | None | I |
C/R | 0.3355 | likely_benign | 0.3633 | ambiguous | -0.512 | Destabilizing | 0.033 | N | 0.549 | neutral | N | 0.395139451 | None | None | I |
C/S | 0.132 | likely_benign | 0.1194 | benign | -1.121 | Destabilizing | None | N | 0.331 | neutral | N | 0.362296314 | None | None | I |
C/T | 0.1747 | likely_benign | 0.163 | benign | -0.89 | Destabilizing | 0.009 | N | 0.419 | neutral | None | None | None | None | I |
C/V | 0.1826 | likely_benign | 0.172 | benign | -0.887 | Destabilizing | 0.004 | N | 0.394 | neutral | None | None | None | None | I |
C/W | 0.3135 | likely_benign | 0.3121 | benign | -0.745 | Destabilizing | 0.427 | N | 0.523 | neutral | N | 0.425635717 | None | None | I |
C/Y | 0.1391 | likely_benign | 0.1309 | benign | -0.735 | Destabilizing | 0.017 | N | 0.535 | neutral | N | 0.406703239 | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.