Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18393 | 55402;55403;55404 | chr2:178602094;178602093;178602092 | chr2:179466821;179466820;179466819 |
N2AB | 16752 | 50479;50480;50481 | chr2:178602094;178602093;178602092 | chr2:179466821;179466820;179466819 |
N2A | 15825 | 47698;47699;47700 | chr2:178602094;178602093;178602092 | chr2:179466821;179466820;179466819 |
N2B | 9328 | 28207;28208;28209 | chr2:178602094;178602093;178602092 | chr2:179466821;179466820;179466819 |
Novex-1 | 9453 | 28582;28583;28584 | chr2:178602094;178602093;178602092 | chr2:179466821;179466820;179466819 |
Novex-2 | 9520 | 28783;28784;28785 | chr2:178602094;178602093;178602092 | chr2:179466821;179466820;179466819 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/S | rs2053610320 | None | 1.0 | D | 0.855 | 0.628 | 0.696735452351 | gnomAD-3.1.2 | 6.58E-06 | None | None | None | None | I | None | 0 | 0 | 0 | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
G/S | rs2053610320 | None | 1.0 | D | 0.855 | 0.628 | 0.696735452351 | gnomAD-4.0.0 | 6.58068E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 2.07125E-04 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
G/A | 0.4583 | ambiguous | 0.4585 | ambiguous | -0.238 | Destabilizing | 1.0 | D | 0.751 | deleterious | D | 0.587143952 | None | None | I |
G/C | 0.5856 | likely_pathogenic | 0.5962 | pathogenic | -0.794 | Destabilizing | 1.0 | D | 0.835 | deleterious | D | 0.587749365 | None | None | I |
G/D | 0.4389 | ambiguous | 0.4567 | ambiguous | -0.778 | Destabilizing | 1.0 | D | 0.871 | deleterious | D | 0.548151009 | None | None | I |
G/E | 0.5879 | likely_pathogenic | 0.6162 | pathogenic | -0.959 | Destabilizing | 1.0 | D | 0.865 | deleterious | None | None | None | None | I |
G/F | 0.9065 | likely_pathogenic | 0.9017 | pathogenic | -1.113 | Destabilizing | 1.0 | D | 0.846 | deleterious | None | None | None | None | I |
G/H | 0.6856 | likely_pathogenic | 0.7016 | pathogenic | -0.437 | Destabilizing | 1.0 | D | 0.834 | deleterious | None | None | None | None | I |
G/I | 0.9207 | likely_pathogenic | 0.9233 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.852 | deleterious | None | None | None | None | I |
G/K | 0.683 | likely_pathogenic | 0.7178 | pathogenic | -0.667 | Destabilizing | 1.0 | D | 0.86 | deleterious | None | None | None | None | I |
G/L | 0.8671 | likely_pathogenic | 0.8572 | pathogenic | -0.483 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/M | 0.8844 | likely_pathogenic | 0.8776 | pathogenic | -0.376 | Destabilizing | 1.0 | D | 0.837 | deleterious | None | None | None | None | I |
G/N | 0.4603 | ambiguous | 0.4365 | ambiguous | -0.336 | Destabilizing | 1.0 | D | 0.856 | deleterious | None | None | None | None | I |
G/P | 0.9834 | likely_pathogenic | 0.9847 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/Q | 0.596 | likely_pathogenic | 0.6244 | pathogenic | -0.687 | Destabilizing | 1.0 | D | 0.871 | deleterious | None | None | None | None | I |
G/R | 0.5787 | likely_pathogenic | 0.6328 | pathogenic | -0.172 | Destabilizing | 1.0 | D | 0.879 | deleterious | D | 0.603365117 | None | None | I |
G/S | 0.2571 | likely_benign | 0.2559 | benign | -0.421 | Destabilizing | 1.0 | D | 0.855 | deleterious | D | 0.586942148 | None | None | I |
G/T | 0.6183 | likely_pathogenic | 0.6014 | pathogenic | -0.547 | Destabilizing | 1.0 | D | 0.861 | deleterious | None | None | None | None | I |
G/V | 0.8445 | likely_pathogenic | 0.849 | pathogenic | -0.372 | Destabilizing | 1.0 | D | 0.841 | deleterious | D | 0.603566922 | None | None | I |
G/W | 0.8463 | likely_pathogenic | 0.8697 | pathogenic | -1.226 | Destabilizing | 1.0 | D | 0.853 | deleterious | None | None | None | None | I |
G/Y | 0.8316 | likely_pathogenic | 0.831 | pathogenic | -0.883 | Destabilizing | 1.0 | D | 0.844 | deleterious | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.