Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18395 | 55408;55409;55410 | chr2:178602088;178602087;178602086 | chr2:179466815;179466814;179466813 |
N2AB | 16754 | 50485;50486;50487 | chr2:178602088;178602087;178602086 | chr2:179466815;179466814;179466813 |
N2A | 15827 | 47704;47705;47706 | chr2:178602088;178602087;178602086 | chr2:179466815;179466814;179466813 |
N2B | 9330 | 28213;28214;28215 | chr2:178602088;178602087;178602086 | chr2:179466815;179466814;179466813 |
Novex-1 | 9455 | 28588;28589;28590 | chr2:178602088;178602087;178602086 | chr2:179466815;179466814;179466813 |
Novex-2 | 9522 | 28789;28790;28791 | chr2:178602088;178602087;178602086 | chr2:179466815;179466814;179466813 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/K | None | None | 0.166 | N | 0.22 | 0.109 | 0.0611884634855 | gnomAD-4.0.0 | 1.59377E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86243E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
Q/A | 0.1368 | likely_benign | 0.126 | benign | -0.554 | Destabilizing | 0.103 | N | 0.19 | neutral | None | None | None | None | I |
Q/C | 0.5168 | ambiguous | 0.4706 | ambiguous | 0.002 | Stabilizing | 0.991 | D | 0.231 | neutral | None | None | None | None | I |
Q/D | 0.307 | likely_benign | 0.2924 | benign | -0.43 | Destabilizing | 0.209 | N | 0.209 | neutral | None | None | None | None | I |
Q/E | 0.0857 | likely_benign | 0.0841 | benign | -0.339 | Destabilizing | 0.001 | N | 0.104 | neutral | N | 0.41497514 | None | None | I |
Q/F | 0.5639 | ambiguous | 0.549 | ambiguous | -0.239 | Destabilizing | 0.901 | D | 0.301 | neutral | None | None | None | None | I |
Q/G | 0.2517 | likely_benign | 0.2464 | benign | -0.907 | Destabilizing | 0.345 | N | 0.252 | neutral | None | None | None | None | I |
Q/H | 0.1935 | likely_benign | 0.1837 | benign | -0.72 | Destabilizing | 0.873 | D | 0.309 | neutral | N | 0.465019958 | None | None | I |
Q/I | 0.2641 | likely_benign | 0.2413 | benign | 0.34 | Stabilizing | 0.561 | D | 0.413 | neutral | None | None | None | None | I |
Q/K | 0.1041 | likely_benign | 0.0989 | benign | -0.392 | Destabilizing | 0.166 | N | 0.22 | neutral | N | 0.388924689 | None | None | I |
Q/L | 0.1245 | likely_benign | 0.1154 | benign | 0.34 | Stabilizing | 0.166 | N | 0.262 | neutral | N | 0.427232361 | None | None | I |
Q/M | 0.2346 | likely_benign | 0.2213 | benign | 0.669 | Stabilizing | 0.965 | D | 0.313 | neutral | None | None | None | None | I |
Q/N | 0.1994 | likely_benign | 0.1904 | benign | -0.929 | Destabilizing | 0.345 | N | 0.243 | neutral | None | None | None | None | I |
Q/P | 0.0966 | likely_benign | 0.0937 | benign | 0.073 | Stabilizing | None | N | 0.122 | neutral | N | 0.362546164 | None | None | I |
Q/R | 0.1256 | likely_benign | 0.1181 | benign | -0.324 | Destabilizing | 0.285 | N | 0.261 | neutral | N | 0.426712286 | None | None | I |
Q/S | 0.137 | likely_benign | 0.1261 | benign | -0.991 | Destabilizing | 0.103 | N | 0.189 | neutral | None | None | None | None | I |
Q/T | 0.0938 | likely_benign | 0.0867 | benign | -0.708 | Destabilizing | 0.002 | N | 0.135 | neutral | None | None | None | None | I |
Q/V | 0.1533 | likely_benign | 0.1392 | benign | 0.073 | Stabilizing | 0.209 | N | 0.268 | neutral | None | None | None | None | I |
Q/W | 0.5619 | ambiguous | 0.5609 | ambiguous | -0.153 | Destabilizing | 0.991 | D | 0.247 | neutral | None | None | None | None | I |
Q/Y | 0.4025 | ambiguous | 0.3903 | ambiguous | 0.064 | Stabilizing | 0.965 | D | 0.339 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.