Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18396 | 55411;55412;55413 | chr2:178602085;178602084;178602083 | chr2:179466812;179466811;179466810 |
N2AB | 16755 | 50488;50489;50490 | chr2:178602085;178602084;178602083 | chr2:179466812;179466811;179466810 |
N2A | 15828 | 47707;47708;47709 | chr2:178602085;178602084;178602083 | chr2:179466812;179466811;179466810 |
N2B | 9331 | 28216;28217;28218 | chr2:178602085;178602084;178602083 | chr2:179466812;179466811;179466810 |
Novex-1 | 9456 | 28591;28592;28593 | chr2:178602085;178602084;178602083 | chr2:179466812;179466811;179466810 |
Novex-2 | 9523 | 28792;28793;28794 | chr2:178602085;178602084;178602083 | chr2:179466812;179466811;179466810 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/V | None | None | None | N | 0.185 | 0.064 | 0.294918367191 | gnomAD-4.0.0 | 1.59353E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 2.78272E-05 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.9591 | likely_pathogenic | 0.9535 | pathogenic | -2.952 | Highly Destabilizing | 0.157 | N | 0.608 | neutral | None | None | None | None | I |
I/C | 0.9511 | likely_pathogenic | 0.9422 | pathogenic | -2.319 | Highly Destabilizing | 0.909 | D | 0.681 | prob.neutral | None | None | None | None | I |
I/D | 0.9988 | likely_pathogenic | 0.9989 | pathogenic | -3.535 | Highly Destabilizing | 0.726 | D | 0.779 | deleterious | None | None | None | None | I |
I/E | 0.9963 | likely_pathogenic | 0.9963 | pathogenic | -3.301 | Highly Destabilizing | 0.726 | D | 0.775 | deleterious | None | None | None | None | I |
I/F | 0.4452 | ambiguous | 0.4403 | ambiguous | -1.851 | Destabilizing | 0.002 | N | 0.294 | neutral | N | 0.5097736 | None | None | I |
I/G | 0.9914 | likely_pathogenic | 0.9908 | pathogenic | -3.518 | Highly Destabilizing | 0.726 | D | 0.765 | deleterious | None | None | None | None | I |
I/H | 0.9931 | likely_pathogenic | 0.9931 | pathogenic | -2.943 | Highly Destabilizing | 0.968 | D | 0.754 | deleterious | None | None | None | None | I |
I/K | 0.9914 | likely_pathogenic | 0.9911 | pathogenic | -2.564 | Highly Destabilizing | 0.726 | D | 0.779 | deleterious | None | None | None | None | I |
I/L | 0.2157 | likely_benign | 0.1963 | benign | -1.299 | Destabilizing | 0.025 | N | 0.385 | neutral | N | 0.437697284 | None | None | I |
I/M | 0.2332 | likely_benign | 0.2296 | benign | -1.18 | Destabilizing | 0.497 | N | 0.597 | neutral | N | 0.460833902 | None | None | I |
I/N | 0.9831 | likely_pathogenic | 0.9853 | pathogenic | -2.957 | Highly Destabilizing | 0.859 | D | 0.777 | deleterious | N | 0.479445136 | None | None | I |
I/P | 0.9959 | likely_pathogenic | 0.9961 | pathogenic | -1.833 | Destabilizing | 0.89 | D | 0.781 | deleterious | None | None | None | None | I |
I/Q | 0.9892 | likely_pathogenic | 0.9889 | pathogenic | -2.821 | Highly Destabilizing | 0.89 | D | 0.771 | deleterious | None | None | None | None | I |
I/R | 0.9873 | likely_pathogenic | 0.9866 | pathogenic | -2.156 | Highly Destabilizing | 0.726 | D | 0.772 | deleterious | None | None | None | None | I |
I/S | 0.9842 | likely_pathogenic | 0.9847 | pathogenic | -3.63 | Highly Destabilizing | 0.497 | N | 0.735 | prob.delet. | N | 0.479191647 | None | None | I |
I/T | 0.9762 | likely_pathogenic | 0.9742 | pathogenic | -3.247 | Highly Destabilizing | 0.124 | N | 0.691 | prob.neutral | N | 0.467328362 | None | None | I |
I/V | 0.203 | likely_benign | 0.1821 | benign | -1.833 | Destabilizing | None | N | 0.185 | neutral | N | 0.470729635 | None | None | I |
I/W | 0.983 | likely_pathogenic | 0.9829 | pathogenic | -2.286 | Highly Destabilizing | 0.968 | D | 0.757 | deleterious | None | None | None | None | I |
I/Y | 0.9303 | likely_pathogenic | 0.9338 | pathogenic | -2.038 | Highly Destabilizing | 0.396 | N | 0.712 | prob.delet. | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.