Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18403 | 55432;55433;55434 | chr2:178602064;178602063;178602062 | chr2:179466791;179466790;179466789 |
N2AB | 16762 | 50509;50510;50511 | chr2:178602064;178602063;178602062 | chr2:179466791;179466790;179466789 |
N2A | 15835 | 47728;47729;47730 | chr2:178602064;178602063;178602062 | chr2:179466791;179466790;179466789 |
N2B | 9338 | 28237;28238;28239 | chr2:178602064;178602063;178602062 | chr2:179466791;179466790;179466789 |
Novex-1 | 9463 | 28612;28613;28614 | chr2:178602064;178602063;178602062 | chr2:179466791;179466790;179466789 |
Novex-2 | 9530 | 28813;28814;28815 | chr2:178602064;178602063;178602062 | chr2:179466791;179466790;179466789 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.722 | N | 0.429 | 0.24 | 0.305410167561 | gnomAD-4.0.0 | 1.59329E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 3.02847E-05 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.4916 | ambiguous | 0.5113 | ambiguous | -0.004 | Destabilizing | 0.415 | N | 0.432 | neutral | None | None | None | None | I |
K/C | 0.6959 | likely_pathogenic | 0.6609 | pathogenic | -0.54 | Destabilizing | 0.996 | D | 0.513 | neutral | None | None | None | None | I |
K/D | 0.8031 | likely_pathogenic | 0.8424 | pathogenic | -0.275 | Destabilizing | 0.775 | D | 0.419 | neutral | None | None | None | None | I |
K/E | 0.3009 | likely_benign | 0.356 | ambiguous | -0.278 | Destabilizing | 0.722 | D | 0.429 | neutral | N | 0.476144682 | None | None | I |
K/F | 0.8119 | likely_pathogenic | 0.82 | pathogenic | -0.325 | Destabilizing | 0.987 | D | 0.499 | neutral | None | None | None | None | I |
K/G | 0.6362 | likely_pathogenic | 0.6572 | pathogenic | -0.141 | Destabilizing | 0.633 | D | 0.435 | neutral | None | None | None | None | I |
K/H | 0.312 | likely_benign | 0.3123 | benign | -0.213 | Destabilizing | 0.989 | D | 0.445 | neutral | None | None | None | None | I |
K/I | 0.4464 | ambiguous | 0.4887 | ambiguous | 0.274 | Stabilizing | 0.923 | D | 0.499 | neutral | None | None | None | None | I |
K/L | 0.4983 | ambiguous | 0.5118 | ambiguous | 0.274 | Stabilizing | 0.775 | D | 0.454 | neutral | None | None | None | None | I |
K/M | 0.3179 | likely_benign | 0.3444 | ambiguous | -0.16 | Destabilizing | 0.995 | D | 0.449 | neutral | N | 0.519668959 | None | None | I |
K/N | 0.5628 | ambiguous | 0.6208 | pathogenic | -0.105 | Destabilizing | 0.722 | D | 0.409 | neutral | N | 0.483846359 | None | None | I |
K/P | 0.9719 | likely_pathogenic | 0.9782 | pathogenic | 0.205 | Stabilizing | 0.961 | D | 0.429 | neutral | None | None | None | None | I |
K/Q | 0.1705 | likely_benign | 0.1819 | benign | -0.216 | Destabilizing | 0.901 | D | 0.434 | neutral | N | 0.488825977 | None | None | I |
K/R | 0.0757 | likely_benign | 0.0751 | benign | -0.141 | Destabilizing | 0.008 | N | 0.149 | neutral | N | 0.464314322 | None | None | I |
K/S | 0.4807 | ambiguous | 0.5066 | ambiguous | -0.46 | Destabilizing | 0.044 | N | 0.23 | neutral | None | None | None | None | I |
K/T | 0.1791 | likely_benign | 0.1995 | benign | -0.34 | Destabilizing | 0.034 | N | 0.231 | neutral | N | 0.413981502 | None | None | I |
K/V | 0.4248 | ambiguous | 0.4473 | ambiguous | 0.205 | Stabilizing | 0.923 | D | 0.417 | neutral | None | None | None | None | I |
K/W | 0.7752 | likely_pathogenic | 0.7785 | pathogenic | -0.436 | Destabilizing | 0.996 | D | 0.611 | neutral | None | None | None | None | I |
K/Y | 0.6933 | likely_pathogenic | 0.7079 | pathogenic | -0.082 | Destabilizing | 0.987 | D | 0.491 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.