Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18407 | 55444;55445;55446 | chr2:178602052;178602051;178602050 | chr2:179466779;179466778;179466777 |
N2AB | 16766 | 50521;50522;50523 | chr2:178602052;178602051;178602050 | chr2:179466779;179466778;179466777 |
N2A | 15839 | 47740;47741;47742 | chr2:178602052;178602051;178602050 | chr2:179466779;179466778;179466777 |
N2B | 9342 | 28249;28250;28251 | chr2:178602052;178602051;178602050 | chr2:179466779;179466778;179466777 |
Novex-1 | 9467 | 28624;28625;28626 | chr2:178602052;178602051;178602050 | chr2:179466779;179466778;179466777 |
Novex-2 | 9534 | 28825;28826;28827 | chr2:178602052;178602051;178602050 | chr2:179466779;179466778;179466777 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | None | None | 0.022 | N | 0.122 | 0.132 | 0.206339911435 | gnomAD-4.0.0 | 1.59329E-06 | None | None | None | None | I | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.86218E-06 | 0 | 0 |
T/I | None | None | 0.669 | N | 0.317 | 0.183 | 0.341696514166 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | I | None | 6.33473E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
T/A | 0.0606 | likely_benign | 0.0578 | benign | -0.566 | Destabilizing | 0.022 | N | 0.122 | neutral | N | 0.427873519 | None | None | I |
T/C | 0.3018 | likely_benign | 0.307 | benign | -0.325 | Destabilizing | 0.998 | D | 0.409 | neutral | None | None | None | None | I |
T/D | 0.3788 | ambiguous | 0.3423 | ambiguous | 0.014 | Stabilizing | 0.974 | D | 0.379 | neutral | None | None | None | None | I |
T/E | 0.2362 | likely_benign | 0.2253 | benign | -0.038 | Destabilizing | 0.915 | D | 0.371 | neutral | None | None | None | None | I |
T/F | 0.1609 | likely_benign | 0.1509 | benign | -0.813 | Destabilizing | 0.949 | D | 0.527 | neutral | None | None | None | None | I |
T/G | 0.243 | likely_benign | 0.2276 | benign | -0.756 | Destabilizing | 0.728 | D | 0.445 | neutral | None | None | None | None | I |
T/H | 0.2131 | likely_benign | 0.2124 | benign | -1.077 | Destabilizing | 0.998 | D | 0.513 | neutral | None | None | None | None | I |
T/I | 0.073 | likely_benign | 0.0703 | benign | -0.168 | Destabilizing | 0.669 | D | 0.317 | neutral | N | 0.49633074 | None | None | I |
T/K | 0.1138 | likely_benign | 0.1371 | benign | -0.651 | Destabilizing | 0.801 | D | 0.363 | neutral | N | 0.47539532 | None | None | I |
T/L | 0.0605 | likely_benign | 0.0595 | benign | -0.168 | Destabilizing | 0.525 | D | 0.354 | neutral | None | None | None | None | I |
T/M | 0.0712 | likely_benign | 0.0694 | benign | 0.07 | Stabilizing | 0.974 | D | 0.415 | neutral | None | None | None | None | I |
T/N | 0.1142 | likely_benign | 0.1076 | benign | -0.379 | Destabilizing | 0.991 | D | 0.356 | neutral | None | None | None | None | I |
T/P | 0.0803 | likely_benign | 0.0729 | benign | -0.27 | Destabilizing | 0.966 | D | 0.398 | neutral | N | 0.460639298 | None | None | I |
T/Q | 0.1495 | likely_benign | 0.1572 | benign | -0.605 | Destabilizing | 0.991 | D | 0.427 | neutral | None | None | None | None | I |
T/R | 0.1191 | likely_benign | 0.1383 | benign | -0.38 | Destabilizing | 0.966 | D | 0.427 | neutral | N | 0.490519488 | None | None | I |
T/S | 0.0996 | likely_benign | 0.0925 | benign | -0.624 | Destabilizing | 0.454 | N | 0.315 | neutral | N | 0.501043126 | None | None | I |
T/V | 0.0669 | likely_benign | 0.0664 | benign | -0.27 | Destabilizing | 0.007 | N | 0.127 | neutral | None | None | None | None | I |
T/W | 0.5241 | ambiguous | 0.5179 | ambiguous | -0.768 | Destabilizing | 0.998 | D | 0.565 | neutral | None | None | None | None | I |
T/Y | 0.2202 | likely_benign | 0.2026 | benign | -0.54 | Destabilizing | 0.974 | D | 0.516 | neutral | None | None | None | None | I |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.