Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18413 | 55462;55463;55464 | chr2:178602034;178602033;178602032 | chr2:179466761;179466760;179466759 |
N2AB | 16772 | 50539;50540;50541 | chr2:178602034;178602033;178602032 | chr2:179466761;179466760;179466759 |
N2A | 15845 | 47758;47759;47760 | chr2:178602034;178602033;178602032 | chr2:179466761;179466760;179466759 |
N2B | 9348 | 28267;28268;28269 | chr2:178602034;178602033;178602032 | chr2:179466761;179466760;179466759 |
Novex-1 | 9473 | 28642;28643;28644 | chr2:178602034;178602033;178602032 | chr2:179466761;179466760;179466759 |
Novex-2 | 9540 | 28843;28844;28845 | chr2:178602034;178602033;178602032 | chr2:179466761;179466760;179466759 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/K | rs2053599230 | None | 0.822 | N | 0.556 | 0.23 | 0.239305524855 | gnomAD-4.0.0 | 1.36917E-06 | None | None | None | None | N | None | 5.9848E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
E/A | 0.1689 | likely_benign | 0.1639 | benign | -0.843 | Destabilizing | 0.822 | D | 0.568 | neutral | N | 0.481469491 | None | None | N |
E/C | 0.7367 | likely_pathogenic | 0.7143 | pathogenic | -0.385 | Destabilizing | 0.998 | D | 0.668 | neutral | None | None | None | None | N |
E/D | 0.1831 | likely_benign | 0.2054 | benign | -1.191 | Destabilizing | 0.006 | N | 0.272 | neutral | N | 0.481720207 | None | None | N |
E/F | 0.6499 | likely_pathogenic | 0.6299 | pathogenic | -0.613 | Destabilizing | 0.993 | D | 0.712 | prob.delet. | None | None | None | None | N |
E/G | 0.271 | likely_benign | 0.2844 | benign | -1.187 | Destabilizing | 0.822 | D | 0.617 | neutral | N | 0.481989566 | None | None | N |
E/H | 0.4458 | ambiguous | 0.403 | ambiguous | -0.964 | Destabilizing | 0.993 | D | 0.625 | neutral | None | None | None | None | N |
E/I | 0.2525 | likely_benign | 0.2345 | benign | 0.089 | Stabilizing | 0.978 | D | 0.713 | prob.delet. | None | None | None | None | N |
E/K | 0.2366 | likely_benign | 0.2133 | benign | -0.498 | Destabilizing | 0.822 | D | 0.556 | neutral | N | 0.462363655 | None | None | N |
E/L | 0.3796 | ambiguous | 0.3522 | ambiguous | 0.089 | Stabilizing | 0.978 | D | 0.697 | prob.neutral | None | None | None | None | N |
E/M | 0.3746 | ambiguous | 0.3499 | ambiguous | 0.619 | Stabilizing | 0.998 | D | 0.685 | prob.neutral | None | None | None | None | N |
E/N | 0.2819 | likely_benign | 0.2756 | benign | -0.912 | Destabilizing | 0.754 | D | 0.568 | neutral | None | None | None | None | N |
E/P | 0.9853 | likely_pathogenic | 0.9895 | pathogenic | -0.2 | Destabilizing | 0.978 | D | 0.689 | prob.neutral | None | None | None | None | N |
E/Q | 0.1412 | likely_benign | 0.1286 | benign | -0.804 | Destabilizing | 0.822 | D | 0.562 | neutral | N | 0.454264247 | None | None | N |
E/R | 0.3672 | ambiguous | 0.3263 | benign | -0.388 | Destabilizing | 0.978 | D | 0.617 | neutral | None | None | None | None | N |
E/S | 0.2074 | likely_benign | 0.1937 | benign | -1.233 | Destabilizing | 0.86 | D | 0.556 | neutral | None | None | None | None | N |
E/T | 0.1756 | likely_benign | 0.1685 | benign | -0.939 | Destabilizing | 0.86 | D | 0.619 | neutral | None | None | None | None | N |
E/V | 0.1539 | likely_benign | 0.144 | benign | -0.2 | Destabilizing | 0.971 | D | 0.665 | neutral | N | 0.480949416 | None | None | N |
E/W | 0.8931 | likely_pathogenic | 0.8924 | pathogenic | -0.456 | Destabilizing | 0.998 | D | 0.653 | neutral | None | None | None | None | N |
E/Y | 0.5791 | likely_pathogenic | 0.5668 | pathogenic | -0.365 | Destabilizing | 0.993 | D | 0.701 | prob.neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.