Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18414 | 55465;55466;55467 | chr2:178602031;178602030;178602029 | chr2:179466758;179466757;179466756 |
N2AB | 16773 | 50542;50543;50544 | chr2:178602031;178602030;178602029 | chr2:179466758;179466757;179466756 |
N2A | 15846 | 47761;47762;47763 | chr2:178602031;178602030;178602029 | chr2:179466758;179466757;179466756 |
N2B | 9349 | 28270;28271;28272 | chr2:178602031;178602030;178602029 | chr2:179466758;179466757;179466756 |
Novex-1 | 9474 | 28645;28646;28647 | chr2:178602031;178602030;178602029 | chr2:179466758;179466757;179466756 |
Novex-2 | 9541 | 28846;28847;28848 | chr2:178602031;178602030;178602029 | chr2:179466758;179466757;179466756 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/I | None | None | 0.982 | N | 0.623 | 0.347 | 0.277730125212 | gnomAD-4.0.0 | 1.20032E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.3125E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
F/A | 0.9558 | likely_pathogenic | 0.9668 | pathogenic | -3.25 | Highly Destabilizing | 0.953 | D | 0.693 | prob.neutral | None | None | None | None | N |
F/C | 0.7954 | likely_pathogenic | 0.8232 | pathogenic | -2.136 | Highly Destabilizing | 0.999 | D | 0.776 | deleterious | N | 0.495516223 | None | None | N |
F/D | 0.9865 | likely_pathogenic | 0.9908 | pathogenic | -3.47 | Highly Destabilizing | 0.998 | D | 0.816 | deleterious | None | None | None | None | N |
F/E | 0.9858 | likely_pathogenic | 0.9913 | pathogenic | -3.303 | Highly Destabilizing | 0.993 | D | 0.795 | deleterious | None | None | None | None | N |
F/G | 0.9759 | likely_pathogenic | 0.9819 | pathogenic | -3.644 | Highly Destabilizing | 0.993 | D | 0.761 | deleterious | None | None | None | None | N |
F/H | 0.8594 | likely_pathogenic | 0.8835 | pathogenic | -1.961 | Destabilizing | 0.986 | D | 0.76 | deleterious | None | None | None | None | N |
F/I | 0.7401 | likely_pathogenic | 0.7911 | pathogenic | -1.958 | Destabilizing | 0.982 | D | 0.623 | neutral | N | 0.494649432 | None | None | N |
F/K | 0.9472 | likely_pathogenic | 0.972 | pathogenic | -2.073 | Highly Destabilizing | 0.993 | D | 0.797 | deleterious | None | None | None | None | N |
F/L | 0.9731 | likely_pathogenic | 0.9787 | pathogenic | -1.958 | Destabilizing | 0.885 | D | 0.561 | neutral | N | 0.47987198 | None | None | N |
F/M | 0.8584 | likely_pathogenic | 0.8908 | pathogenic | -1.779 | Destabilizing | 0.999 | D | 0.67 | neutral | None | None | None | None | N |
F/N | 0.9366 | likely_pathogenic | 0.9502 | pathogenic | -2.417 | Highly Destabilizing | 0.998 | D | 0.822 | deleterious | None | None | None | None | N |
F/P | 0.9985 | likely_pathogenic | 0.999 | pathogenic | -2.4 | Highly Destabilizing | 0.998 | D | 0.829 | deleterious | None | None | None | None | N |
F/Q | 0.9659 | likely_pathogenic | 0.9782 | pathogenic | -2.502 | Highly Destabilizing | 0.998 | D | 0.831 | deleterious | None | None | None | None | N |
F/R | 0.9216 | likely_pathogenic | 0.9561 | pathogenic | -1.388 | Destabilizing | 0.993 | D | 0.82 | deleterious | None | None | None | None | N |
F/S | 0.9426 | likely_pathogenic | 0.9546 | pathogenic | -3.078 | Highly Destabilizing | 0.991 | D | 0.732 | prob.delet. | N | 0.505770503 | None | None | N |
F/T | 0.9535 | likely_pathogenic | 0.9646 | pathogenic | -2.81 | Highly Destabilizing | 0.993 | D | 0.745 | deleterious | None | None | None | None | N |
F/V | 0.7555 | likely_pathogenic | 0.8085 | pathogenic | -2.4 | Highly Destabilizing | 0.939 | D | 0.687 | prob.neutral | N | 0.455981602 | None | None | N |
F/W | 0.5607 | ambiguous | 0.5808 | pathogenic | -0.671 | Destabilizing | 0.998 | D | 0.659 | neutral | None | None | None | None | N |
F/Y | 0.1411 | likely_benign | 0.1358 | benign | -1.098 | Destabilizing | 0.02 | N | 0.219 | neutral | N | 0.487011383 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.