Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18419 | 55480;55481;55482 | chr2:178602016;178602015;178602014 | chr2:179466743;179466742;179466741 |
N2AB | 16778 | 50557;50558;50559 | chr2:178602016;178602015;178602014 | chr2:179466743;179466742;179466741 |
N2A | 15851 | 47776;47777;47778 | chr2:178602016;178602015;178602014 | chr2:179466743;179466742;179466741 |
N2B | 9354 | 28285;28286;28287 | chr2:178602016;178602015;178602014 | chr2:179466743;179466742;179466741 |
Novex-1 | 9479 | 28660;28661;28662 | chr2:178602016;178602015;178602014 | chr2:179466743;179466742;179466741 |
Novex-2 | 9546 | 28861;28862;28863 | chr2:178602016;178602015;178602014 | chr2:179466743;179466742;179466741 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | rs756145817 | -0.266 | 0.034 | N | 0.381 | 0.129 | 0.282179105231 | gnomAD-2.1.1 | 8.05E-06 | None | None | None | None | N | None | 6.47E-05 | 0 | None | 0 | 0 | None | 3.27E-05 | None | 0 | 0 | 0 |
K/E | rs756145817 | -0.266 | 0.034 | N | 0.381 | 0.129 | 0.282179105231 | gnomAD-4.0.0 | 3.18656E-06 | None | None | None | None | N | None | 5.67086E-05 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43373E-05 | 0 |
K/Q | None | None | 0.901 | N | 0.566 | 0.188 | 0.221734844693 | gnomAD-4.0.0 | 1.59328E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43373E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.2578 | likely_benign | 0.229 | benign | 0.075 | Stabilizing | 0.633 | D | 0.55 | neutral | None | None | None | None | N |
K/C | 0.6727 | likely_pathogenic | 0.6296 | pathogenic | -0.297 | Destabilizing | 0.996 | D | 0.757 | deleterious | None | None | None | None | N |
K/D | 0.49 | ambiguous | 0.4367 | ambiguous | -0.156 | Destabilizing | 0.633 | D | 0.606 | neutral | None | None | None | None | N |
K/E | 0.1625 | likely_benign | 0.1442 | benign | -0.165 | Destabilizing | 0.034 | N | 0.381 | neutral | N | 0.467661271 | None | None | N |
K/F | 0.7615 | likely_pathogenic | 0.7222 | pathogenic | -0.211 | Destabilizing | 0.961 | D | 0.779 | deleterious | None | None | None | None | N |
K/G | 0.3138 | likely_benign | 0.2864 | benign | -0.076 | Destabilizing | 0.775 | D | 0.645 | neutral | None | None | None | None | N |
K/H | 0.3991 | ambiguous | 0.3519 | ambiguous | -0.208 | Destabilizing | 0.996 | D | 0.663 | neutral | None | None | None | None | N |
K/I | 0.3574 | ambiguous | 0.3125 | benign | 0.389 | Stabilizing | 0.858 | D | 0.767 | deleterious | None | None | None | None | N |
K/L | 0.3285 | likely_benign | 0.2897 | benign | 0.389 | Stabilizing | 0.633 | D | 0.643 | neutral | None | None | None | None | N |
K/M | 0.2793 | likely_benign | 0.2504 | benign | 0.046 | Stabilizing | 0.986 | D | 0.655 | neutral | N | 0.485649599 | None | None | N |
K/N | 0.3994 | ambiguous | 0.3413 | ambiguous | 0.182 | Stabilizing | 0.901 | D | 0.555 | neutral | N | 0.486516391 | None | None | N |
K/P | 0.3483 | ambiguous | 0.3238 | benign | 0.309 | Stabilizing | 0.961 | D | 0.658 | neutral | None | None | None | None | N |
K/Q | 0.1341 | likely_benign | 0.1223 | benign | 0.02 | Stabilizing | 0.901 | D | 0.566 | neutral | N | 0.452846535 | None | None | N |
K/R | 0.0853 | likely_benign | 0.0841 | benign | -0.011 | Destabilizing | 0.722 | D | 0.601 | neutral | N | 0.505198152 | None | None | N |
K/S | 0.3421 | ambiguous | 0.2915 | benign | -0.215 | Destabilizing | 0.633 | D | 0.554 | neutral | None | None | None | None | N |
K/T | 0.188 | likely_benign | 0.161 | benign | -0.1 | Destabilizing | 0.008 | N | 0.398 | neutral | N | 0.503117852 | None | None | N |
K/V | 0.2842 | likely_benign | 0.2495 | benign | 0.309 | Stabilizing | 0.858 | D | 0.649 | neutral | None | None | None | None | N |
K/W | 0.7752 | likely_pathogenic | 0.7554 | pathogenic | -0.29 | Destabilizing | 0.996 | D | 0.726 | prob.delet. | None | None | None | None | N |
K/Y | 0.6935 | likely_pathogenic | 0.6566 | pathogenic | 0.066 | Stabilizing | 0.987 | D | 0.725 | prob.delet. | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.