Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18420 | 55483;55484;55485 | chr2:178602013;178602012;178602011 | chr2:179466740;179466739;179466738 |
N2AB | 16779 | 50560;50561;50562 | chr2:178602013;178602012;178602011 | chr2:179466740;179466739;179466738 |
N2A | 15852 | 47779;47780;47781 | chr2:178602013;178602012;178602011 | chr2:179466740;179466739;179466738 |
N2B | 9355 | 28288;28289;28290 | chr2:178602013;178602012;178602011 | chr2:179466740;179466739;179466738 |
Novex-1 | 9480 | 28663;28664;28665 | chr2:178602013;178602012;178602011 | chr2:179466740;179466739;179466738 |
Novex-2 | 9547 | 28864;28865;28866 | chr2:178602013;178602012;178602011 | chr2:179466740;179466739;179466738 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/E | None | None | 0.801 | N | 0.481 | 0.205 | 0.403328974453 | gnomAD-4.0.0 | 4.10753E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 5.39916E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
K/A | 0.3203 | likely_benign | 0.3452 | ambiguous | -0.685 | Destabilizing | 0.525 | D | 0.418 | neutral | None | None | None | None | N |
K/C | 0.6947 | likely_pathogenic | 0.6871 | pathogenic | -0.636 | Destabilizing | 0.998 | D | 0.542 | neutral | None | None | None | None | N |
K/D | 0.5905 | likely_pathogenic | 0.6466 | pathogenic | -0.194 | Destabilizing | 0.842 | D | 0.479 | neutral | None | None | None | None | N |
K/E | 0.2623 | likely_benign | 0.2935 | benign | -0.063 | Destabilizing | 0.801 | D | 0.481 | neutral | N | 0.472125729 | None | None | N |
K/F | 0.7589 | likely_pathogenic | 0.7926 | pathogenic | -0.278 | Destabilizing | 0.974 | D | 0.556 | neutral | None | None | None | None | N |
K/G | 0.4021 | ambiguous | 0.4347 | ambiguous | -1.076 | Destabilizing | 0.842 | D | 0.479 | neutral | None | None | None | None | N |
K/H | 0.3723 | ambiguous | 0.3868 | ambiguous | -1.389 | Destabilizing | 0.998 | D | 0.507 | neutral | None | None | None | None | N |
K/I | 0.3633 | ambiguous | 0.4086 | ambiguous | 0.34 | Stabilizing | 0.934 | D | 0.528 | neutral | N | 0.498640326 | None | None | N |
K/L | 0.3312 | likely_benign | 0.3615 | ambiguous | 0.34 | Stabilizing | 0.728 | D | 0.493 | neutral | None | None | None | None | N |
K/M | 0.2263 | likely_benign | 0.2474 | benign | 0.195 | Stabilizing | 0.991 | D | 0.507 | neutral | None | None | None | None | N |
K/N | 0.3904 | ambiguous | 0.427 | ambiguous | -0.589 | Destabilizing | 0.801 | D | 0.433 | neutral | D | 0.533827548 | None | None | N |
K/P | 0.5415 | ambiguous | 0.5963 | pathogenic | 0.028 | Stabilizing | 0.974 | D | 0.497 | neutral | None | None | None | None | N |
K/Q | 0.1821 | likely_benign | 0.1932 | benign | -0.609 | Destabilizing | 0.966 | D | 0.512 | neutral | N | 0.491327565 | None | None | N |
K/R | 0.0995 | likely_benign | 0.0966 | benign | -0.695 | Destabilizing | 0.891 | D | 0.457 | neutral | N | 0.50471815 | None | None | N |
K/S | 0.4175 | ambiguous | 0.446 | ambiguous | -1.251 | Destabilizing | 0.172 | N | 0.189 | neutral | None | None | None | None | N |
K/T | 0.1505 | likely_benign | 0.1601 | benign | -0.903 | Destabilizing | 0.022 | N | 0.233 | neutral | N | 0.432068618 | None | None | N |
K/V | 0.3117 | likely_benign | 0.3476 | ambiguous | 0.028 | Stabilizing | 0.728 | D | 0.481 | neutral | None | None | None | None | N |
K/W | 0.8045 | likely_pathogenic | 0.8126 | pathogenic | -0.155 | Destabilizing | 0.998 | D | 0.586 | neutral | None | None | None | None | N |
K/Y | 0.6447 | likely_pathogenic | 0.6761 | pathogenic | 0.123 | Stabilizing | 0.991 | D | 0.553 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.