Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18424 | 55495;55496;55497 | chr2:178601914;178601913;178601912 | chr2:179466641;179466640;179466639 |
N2AB | 16783 | 50572;50573;50574 | chr2:178601914;178601913;178601912 | chr2:179466641;179466640;179466639 |
N2A | 15856 | 47791;47792;47793 | chr2:178601914;178601913;178601912 | chr2:179466641;179466640;179466639 |
N2B | 9359 | 28300;28301;28302 | chr2:178601914;178601913;178601912 | chr2:179466641;179466640;179466639 |
Novex-1 | 9484 | 28675;28676;28677 | chr2:178601914;178601913;178601912 | chr2:179466641;179466640;179466639 |
Novex-2 | 9551 | 28876;28877;28878 | chr2:178601914;178601913;178601912 | chr2:179466641;179466640;179466639 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/G | rs1553674352 | None | 0.324 | N | 0.319 | 0.144 | 0.117506650769 | gnomAD-4.0.0 | 4.78258E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 2.78956E-05 | None | 0 | 0 | 5.72531E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
D/A | 0.1273 | likely_benign | 0.1346 | benign | -0.116 | Destabilizing | 0.09 | N | 0.343 | neutral | N | 0.494649432 | None | None | N |
D/C | 0.4289 | ambiguous | 0.4352 | ambiguous | -0.128 | Destabilizing | 0.981 | D | 0.369 | neutral | None | None | None | None | N |
D/E | 0.1032 | likely_benign | 0.1157 | benign | -0.182 | Destabilizing | 0.001 | N | 0.205 | neutral | N | 0.419863672 | None | None | N |
D/F | 0.4571 | ambiguous | 0.4582 | ambiguous | -0.06 | Destabilizing | 0.818 | D | 0.36 | neutral | None | None | None | None | N |
D/G | 0.0875 | likely_benign | 0.0878 | benign | -0.288 | Destabilizing | 0.324 | N | 0.319 | neutral | N | 0.494129357 | None | None | N |
D/H | 0.2346 | likely_benign | 0.228 | benign | 0.368 | Stabilizing | 0.928 | D | 0.311 | neutral | N | 0.494476074 | None | None | N |
D/I | 0.325 | likely_benign | 0.3463 | ambiguous | 0.284 | Stabilizing | 0.008 | N | 0.329 | neutral | None | None | None | None | N |
D/K | 0.2478 | likely_benign | 0.2624 | benign | 0.262 | Stabilizing | 0.241 | N | 0.353 | neutral | None | None | None | None | N |
D/L | 0.2937 | likely_benign | 0.3172 | benign | 0.284 | Stabilizing | 0.116 | N | 0.364 | neutral | None | None | None | None | N |
D/M | 0.4543 | ambiguous | 0.4532 | ambiguous | 0.171 | Stabilizing | 0.818 | D | 0.352 | neutral | None | None | None | None | N |
D/N | 0.0831 | likely_benign | 0.0778 | benign | 0.038 | Stabilizing | 0.324 | N | 0.36 | neutral | N | 0.408299884 | None | None | N |
D/P | 0.4812 | ambiguous | 0.58 | pathogenic | 0.172 | Stabilizing | 0.818 | D | 0.323 | neutral | None | None | None | None | N |
D/Q | 0.2289 | likely_benign | 0.2405 | benign | 0.074 | Stabilizing | 0.527 | D | 0.313 | neutral | None | None | None | None | N |
D/R | 0.3053 | likely_benign | 0.3121 | benign | 0.547 | Stabilizing | 0.69 | D | 0.355 | neutral | None | None | None | None | N |
D/S | 0.1105 | likely_benign | 0.1084 | benign | -0.105 | Destabilizing | 0.241 | N | 0.34 | neutral | None | None | None | None | N |
D/T | 0.2003 | likely_benign | 0.2124 | benign | 0.031 | Stabilizing | 0.388 | N | 0.331 | neutral | None | None | None | None | N |
D/V | 0.1986 | likely_benign | 0.2097 | benign | 0.172 | Stabilizing | 0.006 | N | 0.332 | neutral | N | 0.476237029 | None | None | N |
D/W | 0.7117 | likely_pathogenic | 0.7218 | pathogenic | 0.033 | Stabilizing | 0.981 | D | 0.482 | neutral | None | None | None | None | N |
D/Y | 0.179 | likely_benign | 0.1789 | benign | 0.171 | Stabilizing | 0.912 | D | 0.355 | neutral | N | 0.494996148 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.