Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18427 | 55504;55505;55506 | chr2:178601905;178601904;178601903 | chr2:179466632;179466631;179466630 |
N2AB | 16786 | 50581;50582;50583 | chr2:178601905;178601904;178601903 | chr2:179466632;179466631;179466630 |
N2A | 15859 | 47800;47801;47802 | chr2:178601905;178601904;178601903 | chr2:179466632;179466631;179466630 |
N2B | 9362 | 28309;28310;28311 | chr2:178601905;178601904;178601903 | chr2:179466632;179466631;179466630 |
Novex-1 | 9487 | 28684;28685;28686 | chr2:178601905;178601904;178601903 | chr2:179466632;179466631;179466630 |
Novex-2 | 9554 | 28885;28886;28887 | chr2:178601905;178601904;178601903 | chr2:179466632;179466631;179466630 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/R | None | None | 0.997 | N | 0.656 | 0.313 | 0.151104730317 | gnomAD-4.0.0 | 1.20033E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 1.31251E-06 | 0 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
H/A | 0.3401 | ambiguous | 0.3308 | benign | -1.455 | Destabilizing | 0.997 | D | 0.669 | neutral | None | None | None | None | N |
H/C | 0.2042 | likely_benign | 0.187 | benign | -0.721 | Destabilizing | 1.0 | D | 0.717 | prob.delet. | None | None | None | None | N |
H/D | 0.3096 | likely_benign | 0.3141 | benign | -1.228 | Destabilizing | 0.997 | D | 0.645 | neutral | N | 0.505077069 | None | None | N |
H/E | 0.4348 | ambiguous | 0.4218 | ambiguous | -1.063 | Destabilizing | 0.997 | D | 0.667 | neutral | None | None | None | None | N |
H/F | 0.3417 | ambiguous | 0.3312 | benign | 0.16 | Stabilizing | 0.999 | D | 0.652 | neutral | None | None | None | None | N |
H/G | 0.3832 | ambiguous | 0.3959 | ambiguous | -1.882 | Destabilizing | 0.997 | D | 0.669 | neutral | None | None | None | None | N |
H/I | 0.3976 | ambiguous | 0.3689 | ambiguous | -0.218 | Destabilizing | 0.999 | D | 0.71 | prob.delet. | None | None | None | None | N |
H/K | 0.4378 | ambiguous | 0.4412 | ambiguous | -0.98 | Destabilizing | 0.997 | D | 0.645 | neutral | None | None | None | None | N |
H/L | 0.1889 | likely_benign | 0.1961 | benign | -0.218 | Destabilizing | 0.999 | D | 0.649 | neutral | N | 0.502303336 | None | None | N |
H/M | 0.4934 | ambiguous | 0.4683 | ambiguous | -0.417 | Destabilizing | 1.0 | D | 0.689 | prob.neutral | None | None | None | None | N |
H/N | 0.1154 | likely_benign | 0.1108 | benign | -1.4 | Destabilizing | 0.997 | D | 0.685 | prob.neutral | N | 0.455728113 | None | None | N |
H/P | 0.2483 | likely_benign | 0.2979 | benign | -0.616 | Destabilizing | 0.999 | D | 0.694 | prob.neutral | N | 0.475543596 | None | None | N |
H/Q | 0.2673 | likely_benign | 0.2616 | benign | -1.031 | Destabilizing | 0.999 | D | 0.642 | neutral | N | 0.504730353 | None | None | N |
H/R | 0.234 | likely_benign | 0.2538 | benign | -1.346 | Destabilizing | 0.997 | D | 0.656 | neutral | N | 0.455474623 | None | None | N |
H/S | 0.2482 | likely_benign | 0.2357 | benign | -1.531 | Destabilizing | 0.997 | D | 0.673 | neutral | None | None | None | None | N |
H/T | 0.3217 | likely_benign | 0.2987 | benign | -1.245 | Destabilizing | 0.999 | D | 0.633 | neutral | None | None | None | None | N |
H/V | 0.3444 | ambiguous | 0.3282 | benign | -0.616 | Destabilizing | 0.999 | D | 0.699 | prob.neutral | None | None | None | None | N |
H/W | 0.4506 | ambiguous | 0.4486 | ambiguous | 0.614 | Stabilizing | 1.0 | D | 0.705 | prob.neutral | None | None | None | None | N |
H/Y | 0.133 | likely_benign | 0.1344 | benign | 0.557 | Stabilizing | 0.997 | D | 0.647 | neutral | N | 0.454967644 | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.