Isoform | Protein Position | Transcript Position | Chromosomal Position (HG38) | Chromosomal Position (HG19) |
---|---|---|---|---|
IC | 18429 | 55510;55511;55512 | chr2:178601899;178601898;178601897 | chr2:179466626;179466625;179466624 |
N2AB | 16788 | 50587;50588;50589 | chr2:178601899;178601898;178601897 | chr2:179466626;179466625;179466624 |
N2A | 15861 | 47806;47807;47808 | chr2:178601899;178601898;178601897 | chr2:179466626;179466625;179466624 |
N2B | 9364 | 28315;28316;28317 | chr2:178601899;178601898;178601897 | chr2:179466626;179466625;179466624 |
Novex-1 | 9489 | 28690;28691;28692 | chr2:178601899;178601898;178601897 | chr2:179466626;179466625;179466624 |
Novex-2 | 9556 | 28891;28892;28893 | chr2:178601899;178601898;178601897 | chr2:179466626;179466625;179466624 |
Novex-3 | None | None | chr2:None | chr2:None |
SNV | RS | DUET |
PolyPhen-2 |
Condel |
Rhapsody |
REVEL |
MVP |
Source |
MAF |
Disease |
Zygosity |
Site annotation |
mCSM PPI |
Predicted PPI site |
Comments |
AFR |
AMR |
AMS |
ASJ |
EAS |
EUR |
FIN |
MDE |
NFE |
SAS |
OTH |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/M | None | None | 0.317 | N | 0.668 | 0.043 | 0.247322355667 | gnomAD-4.0.0 | 2.05506E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 2.70002E-06 | 0 | 0 |
I/T | None | None | 0.002 | N | 0.415 | 0.155 | 0.454331543959 | gnomAD-4.0.0 | 1.5954E-06 | None | None | None | None | N | None | 0 | 0 | None | 0 | 0 | None | 0 | 0 | 0 | 1.43885E-05 | 0 |
SAV |
AlphaMissense (IC) |
AlphaMissense Class (IC) |
AlphaMissense (N2AB) |
AlphaMissense Class (N2AB) |
mCSM |
mCSM class |
PolyPhen-2 |
PolyPhen-2 Class |
Rhapsody |
Rhapsody Class |
Condel |
Condel Score |
Site annotation |
mCSM PPI |
Predicted PPI site |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
I/A | 0.744 | likely_pathogenic | 0.7566 | pathogenic | -3.148 | Highly Destabilizing | 0.035 | N | 0.574 | neutral | None | None | None | None | N |
I/C | 0.8074 | likely_pathogenic | 0.809 | pathogenic | -2.585 | Highly Destabilizing | 0.824 | D | 0.625 | neutral | None | None | None | None | N |
I/D | 0.9734 | likely_pathogenic | 0.982 | pathogenic | -3.814 | Highly Destabilizing | 0.555 | D | 0.645 | neutral | None | None | None | None | N |
I/E | 0.9566 | likely_pathogenic | 0.9688 | pathogenic | -3.506 | Highly Destabilizing | 0.555 | D | 0.646 | neutral | None | None | None | None | N |
I/F | 0.2351 | likely_benign | 0.2512 | benign | -1.794 | Destabilizing | 0.38 | N | 0.639 | neutral | None | None | None | None | N |
I/G | 0.9216 | likely_pathogenic | 0.9311 | pathogenic | -3.749 | Highly Destabilizing | 0.262 | N | 0.63 | neutral | None | None | None | None | N |
I/H | 0.9185 | likely_pathogenic | 0.9365 | pathogenic | -3.289 | Highly Destabilizing | 0.935 | D | 0.657 | neutral | None | None | None | None | N |
I/K | 0.8952 | likely_pathogenic | 0.9273 | pathogenic | -2.443 | Highly Destabilizing | 0.484 | N | 0.647 | neutral | N | 0.483259002 | None | None | N |
I/L | 0.0971 | likely_benign | 0.0966 | benign | -1.335 | Destabilizing | 0.012 | N | 0.449 | neutral | N | 0.341613532 | None | None | N |
I/M | 0.1592 | likely_benign | 0.1613 | benign | -1.601 | Destabilizing | 0.317 | N | 0.668 | neutral | N | 0.431600818 | None | None | N |
I/N | 0.8113 | likely_pathogenic | 0.8612 | pathogenic | -3.113 | Highly Destabilizing | 0.555 | D | 0.659 | neutral | None | None | None | None | N |
I/P | 0.9321 | likely_pathogenic | 0.9553 | pathogenic | -1.931 | Destabilizing | 0.555 | D | 0.655 | neutral | None | None | None | None | N |
I/Q | 0.9116 | likely_pathogenic | 0.9325 | pathogenic | -2.795 | Highly Destabilizing | 0.791 | D | 0.669 | neutral | None | None | None | None | N |
I/R | 0.8652 | likely_pathogenic | 0.9078 | pathogenic | -2.334 | Highly Destabilizing | 0.484 | N | 0.658 | neutral | N | 0.483432361 | None | None | N |
I/S | 0.7917 | likely_pathogenic | 0.8219 | pathogenic | -3.716 | Highly Destabilizing | 0.081 | N | 0.592 | neutral | None | None | None | None | N |
I/T | 0.6473 | likely_pathogenic | 0.6695 | pathogenic | -3.251 | Highly Destabilizing | 0.002 | N | 0.415 | neutral | N | 0.445124689 | None | None | N |
I/V | 0.0907 | likely_benign | 0.0907 | benign | -1.931 | Destabilizing | None | N | 0.272 | neutral | N | 0.438678719 | None | None | N |
I/W | 0.9173 | likely_pathogenic | 0.9313 | pathogenic | -2.227 | Highly Destabilizing | 0.935 | D | 0.682 | prob.neutral | None | None | None | None | N |
I/Y | 0.758 | likely_pathogenic | 0.7954 | pathogenic | -2.093 | Highly Destabilizing | 0.555 | D | 0.637 | neutral | None | None | None | None | N |
Titin has multiple isoforms, the longest being the theoretical IC (inferred complete) isoform which contains all 363 in-frame titin exons. Here all isoform positions have been mapped onto the IC sequence, with an exception being the C-terminal of the much shorter novex-3 isoform. This contains the out of frame exon 48 which cannot be mapped to the other isoforms.